I am trying to make a custom label color scheme and wanted to change the None. Region but the FreeSurferColorLUT.txt only lists the unknown region (0) rather than None.  I replaced the unknown region label name with None. to no avail like this.  Is the None. region a different label number and color code?

 

  0  None.                           120 120 120   0

  1  bankssts                        120 120 120   0

  2  caudalanteriorcingulate         120 120 120   0

  3  caudalmiddlefrontal             120 120 120   0

  4  corpuscallosum                  120 120 120   0

  5  cuneus                          120 120 120   0

  6  entorhinal                      120 120 120   0

  7  fusiform                        120 120 120   0

  8  inferiorparietal                120 120 120   0

  9  inferiortemporal                120 120 120   0

10  isthmuscingulate                120 120 120   0

11  lateraloccipital                120 120 120   0

12  lateralorbitofrontal            120 120 120   0

13  lingual                         120 120 120   0

14  medialorbitofrontal             120 120 120   0

15  middletemporal                  120 120 120   0

16  parahippocampal                 120 120 120   0

17  paracentral                     120 120 120   0

18  parsopercularis                 120 120 120   0

19  parsorbitalis                   120 120 120   0

20  parstriangularis                120 120 120   0

21  pericalcarine                   255 0   0     0

22  postcentral                     120 120 120   0

23  posteriorcingulate              120 120 120   0

24  precentral                      255 192 203   0

25  precuneus                       120 120 120   0

26  rostralanteriorcingulate        120 120 120   0

27  rostralmiddlefrontal            255 99 71    0

28  superiorfrontal                 120 120 120   0           

29  superiorparietal                240 128 128   0

30  superiortemporal                120 120 120   0

31  supramarginal                   120 120 120   0

32  frontalpole                     120 120 120   0

33  temporalpole                    120 120 120   0

34  transversetemporal              255 69   0    0

35  insula                          120 120 120   0

 

Eric Axelson

Research Specialist

Department of Psychiatry

Iowa Neuroimaging Consortium

University of Iowa

319-384-9206

eric-axelson@uiowa.edu

 




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