Hello Freesurfer experts,

I would like to use mri_segstats with two different masks and thresholds, such as:

mri_segstats --mask mask1 --maskthresh thresh1 --mask mask2 --maskthresh thresh2

This command can run smoothly with our any error. However, I am not clear if the results are correct. I mean if mri_segstats uses the overlap between two masks or only uses the last input mask and threshold? Any suggestions?

Thank you and best regards,

Lizhi