Hi Experts,

I am running Freesurfer v6.0 on a Cluster. I've traied this command:

recon-all -i $IMAGEN -s $SUJETO -all -hippocampal-subfields-T1 -brainstem-structures

Although all step in recon-all works fine, hippocampal-subfields process allocate much more RAM than previous step (10 GB of RAM more or less, and take about 30 mins to be completed, according to other post in the forum).

I am thinking in run these one after another, in order to not need to reserve a lot of memory for a long period of time (just for optimization)

I want to know which are the files (from recon-all process) that hippocampal-subfields process needs? Just to be sure that these will be transferred to the node before the process starts.

If you please help me

Cheers