Hi,

I recently installed the updated mri_segstats (ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/mri_segstats.linux). This seems to work fine for recalculating the supratentorial volume. However, it is causing my new recons to fail (see example error below). Any suggestions?

Thanks,

-Tyler

$Id: mri_segstats.c,v 1.86 2012/07/16 14:39:07 greve Exp $
cwd 
cmdline mri_segstats --id 1 --seg ./tmp.mri_nu_correct.mni.24644/ones.mgz --i ./tmp.mri_nu_correct.mni.24644/nu2.mnc --sum ./tmp.mri_nu_correct.mni.24644/sum.junk --avgwf ./tmp.mri_nu_correct.mni.24644/output.mean.dat 
sysname  Linux
hostname login001
machine  x86_64
user     tblazey
UseRobust  0
Loading ./tmp.mri_nu_correct.mni.24644/ones.mgz
Loading ./tmp.mri_nu_correct.mni.24644/nu2.mnc
Voxel Volume is 1 mm^3
Generating list of segmentation ids
Found   1 segmentations
Computing statistics for each segmentation
  0     1      0  0

Reporting on   0 segmentations
Computing spatial average of each frame

Writing to ./tmp.mri_nu_correct.mni.24644/output.mean.dat
(standard_in) 1: parse error




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