If you sym link the already finished bedpostx directory to $SUBJECT/dmri.bedpostX, you should be able to run trac-all -prep and trac-all -path without any issues (adjusting the config that comes with tracula)
On 09/03/2014 05:04 PM, Katherine Damme wrote:
Hello Freesurfer Community!

I have sucessfully completed diffusion preprocessing in FSL and the recon-all of the structural image and would like to use tracula for the tract reconstruction. I keep having trouble with my configuration file.

Does anyone have a bedpostX tracula config file they could share as an example?

Thank you!

Kate


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