Hi Arman,

should be possible by passing the - - affine flag. I think I also experimented around with a -base-affine flag to recon-all for that (instead of -base). It is experimental!

Best, Martin

> On 07 Apr 2017, at 13:34, Arman Eshaghi <arman.eshaghi@gmail.com> wrote:
>
> Hi,
>
> I wonder if there is a way for mri_robust_template to perform iterative registration with 9 DOF rather than 6-7 default. The rational is to allow for a bit of scaling to adjust for potential scanner drifts in a longitudinal study over years.
>
> Thanks,
> Arman

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