Thank you bruce,
Now I'm trying to flatten a part of the surface, now i'm wondering if it is possible to set an overlay to the flatten surface just as in the inflated by loading it on tksurfer.

Bests,
Gabriel
 





> Date: Fri, 20 May 2011 08:26:40 -0400
> From: fischl@nmr.mgh.harvard.edu
> To: gabriellbk@hotmail.com
> CC: freesurfer@nmr.mgh.harvard.edu
> Subject: Re: [Freesurfer] flattenning question
>
> Hi Gabriel
>
> you cut the patch out in tksurfer first, then call mris_flatten. For
> small patches such as occipital ones we typically use the -complete
> option these days which minimizes the complete distance distortion matrix.
>
> cheers
> Bruce
>
>
> On Fri, 20 May 2011, Gabriel Go.Es. wrote:
>
> >
> > Dear FreeSurfers
> >
> > I'm wondering about the flattenning options of FS I've saw that the "mris-flatten" command does the trick but, it asks for a patch, my questions are: can I flat any cortical region? and, how do I create a patch to mris_flatten?
> >
> > Thanks in advanced,
> > Gabriel
> >
> >
> >
>
>
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