I am running recon-all on a healthy subject and I am also trying to get the hippocampal subfields segmentation.
On the mri directory there is no hippocampus output, and the recon-all exited with errors.


Error:

SUBJECTS_DIR    /home/lub_jungs/Documents/Daten_Renata/Hippocampus_data/T1s_and_T2s/20110815
FREESURFER_HOME /usr/local/freesurfer
Loading source label.
Invalid argument
ERROR reading /home/lub_jungs/Documents/Daten_Renata/Hippocampus_data/T1s_and_T2s/20110815/fsaverage/label/lh.BA1_exvivo.label
Linux lundb2 4.4.0-28-generic #47-Ubuntu SMP Fri Jun 24 10:09:13 UTC 2016 x86_64 x86_64 x86_64 GNU/Linux

recon-all -s no_T2_20110815 exited with ERRORS at Do 7. Jul 22:26:35 CEST 2016

Thank you!