Hi Evan

Is it a volumetric atlas or a surface one?

Cheers

Bruce

From: freesurfer-bounces@nmr.mgh.harvard.edu <freesurfer-bounces@nmr.mgh.harvard.edu> On Behalf Of Evan Collins
Sent: Saturday, June 12, 2021 11:33 AM
To: freesurfer@nmr.mgh.harvard.edu
Subject: [Freesurfer] Inquiry about creating .label files from .nii file

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FreeSurfer,

I currently have a .nii atlas file and a corresponding LUT (look-up table). The atlas is appropriately segmented and colored as seen in Freeview. How do I create/export the corresponding .label and .annot files?

Thank you.