Dear FreeSurfer Experts,

I was trying to run freesurfer on one of my MPRAGEs that was acquired on 7T scanner with isotropic resolution of 0.5mm. I have got two different errors below. Could you please suggest something for me?

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> > #@# Talairach Failure Detection Tue Sep 9 16:02:41 BST 2008
> > /data_local/ali/freesurfer/subjects/MPRAGE/MS_PC/mri
> > talairach_afd -T 0.005 -xfm transforms/talairach.xfm
> > ERROR: talairach_afd: Talairach Transform: transforms/talairach.xfm ***FAILED*** (p=0.0090, pval=0.0000 < threshold=0.0050)
> > Linux morgana 2.6.11.4-21.11-smp #1 SMP Thu Feb 2 20:54:26 GMT 2006 x86_64 x86_64 x86_64 GNU/Linux
> > recon-all exited with ERRORS at Tue Oct 10 16:12:41 BST 2008

*************************WATERSHED**************************

Sorting...

first estimation of the COG coord: x=208 y=168 z=180 r=51

first estimation of the main basin volume: 562273 voxels

mean intensity too low !

Modification of the image: intensity*0.50

first estimation of the COG coord: x=208 y=168 z=179 r=51

first estimation of the main basin volume: 559292 voxels

mean intensity too low !

Modification of the image: intensity*3.72

first estimation of the COG coord: x=208 y=168 z=180 r=51

first estimation of the main basin volume: 569632 voxels

mri_watershed Error:

Interpolation problem in the white matter curve analysis

Linux morgana 2.6.11.4-21.11-smp #1 SMP Thu Feb 2 20:54:26 GMT 2006 x86_64 x86_64 x86_64 GNU/Linux

recon-all exited with ERRORS at Tue Oct 14 18:44:05 BST 2008

Many thanks in advance

Ali

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