External Email - Use Caution        

Hi Amrita

please don't take an image of the text and send us that. Just copy and paste the text directly into the email. This is *much* more useful for us.

cheers
Bruce


On Fri, 25 Jan 2019, Amrita Bedi wrote:

        External Email - Use Caution        


[0a440090-c896-4f22-8bd2-fe98f24c8013]
On Friday, January 25, 2019, Amrita Bedi <amibedi273@gmail.com> wrote:
      [IMAGE]
       Here you go. 
      On Friday, January 25, 2019, Greve, Douglas N.,Ph.D. <DGREVE@mgh.harvard.edu> wrote:
            Hi Amrita, can you just paste the text into the email?
            thanks
            doug

            On 1/25/19 10:51 AM, Amrita Bedi wrote:

              External Email - Use Caution        

      Hi Dr Greve, 
Ran mris_fwhm and got the attached.

On Thursday, January 24, 2019, Greve, Douglas N.,Ph.D. <DGREVE@mgh.harvard.edu> wrote:
      Based on the output below, it looks like there are problems with running
      one of the freesurfer binaries. Can you run mris_fwhm ? Just type the
      command and return and see what happens.



      /home/apps/freesurfer-6.0/freesurfer/bin/mris_fwhm --mask
      /share/VA_Imaging/Projects/salat/2389_TRT/abedi/TRT_0008_recon/Bold1/fc.lpccseed.surf.lh/mask.nii.gz
      --i
      /share/VA_Imaging/Projects/salat/2389_TRT/abedi/TRT_0008_recon/Bold1/fc.lpccseed.surf.lh/rho1mn.nii.gz
      --o
      /share/VA_Imaging/Projects/salat/2389_TRT/abedi/TRT_0008_recon/Bold1/fc.lpccseed.surf.lh/rho1mn.sm.nii.gz
      --fwhm 20.000000 --smooth-only --s fsaverage --hemi lh --sd
      /share/VA_Imaging/Projects/salat/2389_TRT/abedi
      /home/apps/freesurfer-6.0/freesurfer/bin/mris_fwhm:
      /home/apps/matlab/MATLAB/R2011b/sys/os/glnxa64/libstdc++.so.6: version
      `GLIBCXX_3.4.11' not found (required by
      /home/apps/freesurfer-6.0/freesurfer/bin/mris_fwhm)



      On 1/23/19 10:11 AM, Amrita Bedi wrote:
      >
      >         External Email - Use Caution
      >
      > Hi Dr Greve,
      >
      > Attached is the log file.
      >
      > On Tuesday, January 22, 2019, Greve, Douglas N.,Ph.D.
      > <DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu>> wrote:
      >
      >     Can you send the full terminal output and/or the log file?
      >
      >     On 1/22/19 2:53 PM, Amrita Bedi wrote:
      >     >
      >     >         External Email - Use Caution
      >     >
      >     > Hello Freesurfer developers,
      >     >
      >     > I was following the functional connectivity walkthrough for resting
      >     > stage BOLD data and I got the attached error when I ran step 8
      >     > (selxavg3-sess). Does anyone have any thoughts on how to trouble
      >     shoot
      >     > this?
      >     > Not sure if it’s of any use but I ran this using Freesurfer 6.0 on
      >     > Centos 7.4
      >     >
      >     > Thank You.
      >     >
      >     > Best
      >     > Amrita
      >     >
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