Knut J Bjuland wrote:
> Hi Bruce
>
>
> Is it possible to use ascript to create a similar
figure to the jpg
> file I am attaching?
>
> Knut J
>
>
>
> On 07. feb. 2012 15:09, Bruce Fischl wrote:
>> Hi Knut
>>
>> you can use a tcl script in tksurfer if you
want. You are probably
>> better off doing the 10^-log(p) on your own and
saving it as a
>> separate overlay. There are plenty of tcl
scripts in the distribution
>> as examples. A simple one would be:
>>
>> set val
$home/$subject/label/$hemi.your_overlay.mgz
>> puts "loading overlay $val"
>> sclv_read_binary_values sclv_current_field
>> redraw
>> save_tiff $odir/$hemi.your_overlay.lateral.tif
>> rotate_brain_y 180
>> redraw
>> save_tiff $odir/$hemi.your_overlay.medial.tif
>>
>>
>> put that in a file named something.tcl then
load tksurfer with -tcl
>> something.tcl
>>
>> I don't know about the 500dpi though, sorry.
>>
>> cheers
>> Bruce
>>
>>
>>
>> On Tue, 7 Feb 2012, Knut J Bjuland wrote:
>>
>>> I have used Tksurfer to make image from
cross subject statistics
>>> maps in
>>> mgh files. Is it possible to use a script
to make image with both
>>> hemisphere in lateral and medial view. I
would also like to display p
>>> values as 10^-log(p). Is this possible? Can
I use Matlat or FDR? How
>>> can
>>> I produce image with 500 dpi in tksurfer?
>>>
>>> Knut J
>>>
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>>>
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>>>
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
>>>
>>>
>>>
>>
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