On Mon, Jul 18, 2011 at 4:16 PM, Satrajit Ghosh <satra@mit.edu> wrote:

hi all,

i'm trying to rerun some subjects processed with 5.0 with 5.1 and am getting the following error on all the subjects.

simply executing recon-all -s subjid -all

any ideas?

cheers,

satra

---------- unfolding failed - restoring original position --------------------
0750: dt=0.001250, rms=0.380 (0.000%), neg=0, invalid=766
writing output transformation to transforms/talairach.m3z...
GCAMwrite
GCAMwrite:: m3z loop
GCAMwrite:: the command is: gzip -f -c > transforms/talairach.m3z
registration took 4 hours, 1 minutes and 50 seconds.
ERROR: mri_ca_register with non-zero status 1
but continuing despite the error
#--------------------------------------
#@# CA Reg Inv Mon Jul 18 14:54:53 EDT 2011
/g2/users/satra/TESTCVS/surfaces/ek041bk/mri

mri_ca_register -invert-and-save transforms/talairach.m3z

Loading, Inverting, Saving, Exiting ...
Reading transforms/talairach.m3z
zcat transforms/talairach.m3z
Inverting GCAM
Saving inverse
ERROR: mri_ca_register with non-zero status 0