what are your exact mri_convert commands?
doug
> _______________________________________________
On 08/09/2012 06:05 PM, Joshua Lee wrote:
> I used mri_convert to resample my norm.mgz to 0.25 mm iso nii.gz, and
> then again back up to 1mm isotropic space. The resultant image shifted
> up a voxel from the original converted straght to nii.gz. This points
> to the resampling procedure, and not the conversion to different file
> format. Suggestions?
>
> Note: I wanted to hand trace the hippocampus in the norm.mgz, and
> upsampled the norm.mgz to trace on. I traced it, and then downsampled
> to 1mm to compare with Freesurfer segmentation, but found it shifted.
> Josh
>
>
>
> Freesurfer mailing list
> Freesurfer@nmr.mgh.harvard.edu
> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
--
Douglas N. Greve, Ph.D.
MGH-NMR Center
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