Good morning Doug,

I can load ?h.white and rh.smoothwm but not lh.smoothwm to freeview. I can even load lh.smoothwm.nofix. So apparently, that is the corrupted file. So, would you tell me how to regenerate the lh.smoothwm without redoing the whole recon?

Thanks

From: freesurfer-bounces@nmr.mgh.harvard.edu <freesurfer-bounces@nmr.mgh.harvard.edu> on behalf of Douglas N. Greve <dgreve@mgh.harvard.edu>
Sent: Friday, November 13, 2020 9:58 AM
To: freesurfer@nmr.mgh.harvard.edu <freesurfer@nmr.mgh.harvard.edu>
Subject: Re: [Freesurfer] mris_pmake error - freadFloat: fread failed

Can you open the smoothwm with another application? Eg, mris_info or freeview -f

On 11/12/2020 9:52 AM, Nasr, Shahin,Ph.D. wrote:

Hi Surfers,

For one subject, when I run mris_pmake as below:

mris_pmake --subject <Subject_Name> --hemi lh --surface smoothwm --mpmProg pathFind --mpmArgs vertexStart:<Start Vertex>,vertexEnd:<End Vertex> --mpmOverlay euclidean

I get the following error:

mris_pmake error - freadFloat: fread failed

This error appears irrespective of the Start/End vertex, as far as I see. I guess this error is because a file in the subject's brain recon is corrupted. But unfortunately, the error message is not helpful. I even tried to open the error.log. But I do not see any further info there.

Any suggestions?

Shahin
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