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Hello£¬ Dear FreeSurfer Developers,

 

I¡¯m a doctoral student from Xiangya 2nd Hospital of Central South University, and also a beginner to FreeSurfer. I'm attempting to follow the steps descripted on ¡®Practice Working with Data¡¯ (http://surfer.nmr.mgh.harvard.edu/fswiki/FsTutorial/Practice) with our own data, but I¡¯ve met the same problem several times when I programing the command ¡®recon-all -all -i 61492283 -s Sub219¡¯:

(**ps: 61492283 is the T1 file I found after programing the command 'dcmunpack -src . -scanonly.log')

 

SUBJECTS_DIR   /media/dell/AA32E/Data_prac/219/20181211/19470000

(**PS: 19470000 is the folder where the T1 located)

 

FREESURFER_HOME  /usr/local/freesurfer

 

Loading source label

 

Invalid argument

 

ERROR reading  /media/dell/AA32E/Data_prac/219/20181211/19470000/fsaverage/label/lh.BA1_exvivo.label

 

recon-all -s Sub219 exited with ERRORS at <local time here>

 

 

I've searched the ¡®lh.BA1_exvivo.label¡¯ file in the related path and no such file here.  

 

1) FreeSurfer version: freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.0-2beb96c

2) Platform: Ubuntu14.04 LTS

3) uname -a: Linux dell 3.13.0-24-generic #46-Ubuntu SMP Thu Apr 10 19:11:08 UTC 2014 x86_64 x86_64 x86_64 GNU/Linux

4) recon-all.log: see attached

 

Thank u for viewing, and I will be waiting here for your professional advice !