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Hello£¬
Dear
FreeSurfer Developers,
I¡¯m
a doctoral student from Xiangya 2nd Hospital of Central South
University, and also a beginner to FreeSurfer. I'm attempting to follow the steps
descripted on ¡®Practice Working with Data¡¯ (http://surfer.nmr.mgh.harvard.edu/fswiki/FsTutorial/Practice)
with our own data, but I¡¯ve met the same problem several times when I programing
the command ¡®recon-all -all -i 61492283 -s Sub219¡¯:
(**ps: 61492283 is the T1 file I found after programing the
command 'dcmunpack -src . -scanonly.log')
SUBJECTS_DIR /media/dell/AA32E/Data_prac/219/20181211/19470000
(**PS: 19470000 is
the folder where the T1 located)
FREESURFER_HOME /usr/local/freesurfer
Loading source label
Invalid argument
ERROR reading /media/dell/AA32E/Data_prac/219/20181211/19470000/fsaverage/label/lh.BA1_exvivo.label
recon-all -s Sub219
exited with ERRORS at <local time here>
I've
searched the ¡®lh.BA1_exvivo.label¡¯ file in the related path and no such file
here.
1)
FreeSurfer version: freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.0-2beb96c
2)
Platform: Ubuntu14.04 LTS
3)
uname -a: Linux dell 3.13.0-24-generic #46-Ubuntu SMP Thu Apr 10 19:11:08 UTC
2014 x86_64 x86_64 x86_64 GNU/Linux
4)
recon-all.log: see attached
Thank
u for viewing, and I will be waiting here for your professional advice !