When performing manual edits on brain masks, white matter, and gray matter, do I have to strictly follow the sequences(process stages) listed
here?
For instance, the link suggests that "autorecon2-pial is used after editing brain volume *after running -autorecon2".
In other words, is it okay to perform "autorecon2-pial" before "autorecon2-wm"?
Thank you for your time,
--
David S. Lee
Associate Research Specialist
Center for Healthy Minds