Hi!

I am having difficulties setting the timewindow parameter in mkanalysis-sess in Freesurfer v5.3.

I am trying to use 80 (data acquired with MION), but the parameter does not seem to affect analysis.info, where it is always 40.

Is it possible to force a different timewindow?

Below is some info from analysis.info.

Thanks, Caspar

# FSBUILD freesurfer-Linux-centos6_x86_64-stable-pub-v5.3.0

# MKAVERSION $Id: mkanalysis-sess,v 1.64.2.5 2013/01/22 21:52:07 greve Exp $
# MKACMD /neuro_tools/freesurfer/fsfast/bin/mkanalysis-sess -fsd bold -native -timeoffset -2/2 -event-related -paradigm xxxx.para -nconditions 4 -TR 2 -gammafit 0 8 -gammaexp 0.3 -timewindow 80 -refeventdur 0.5 -polyfit 2 -hpf 0.0109 -analysis xxxx -funcstem xxxx -runlistfile xxxx.list -nuisreg motion.dat 6 -tpef tpef.dat -acfbins 14 -acffwhm 0 -mask xxxx -force

analysis xxxx
mcstem fmc
funcstem xxxx
fsd bold
runlistfile xxxx.list
TR 2
RegDOF 6
PerSession 1
RawSpace volume native
mask xxxx
RawFWHM 0
RawSTC none
UseB0DC 0
ApplySubCortMask 1
inorm 100
acfbins 14
fixacf 1
acffwhm 0
acfsvd 0
designtype event-related
tpexclude tpef.dat
nskip 0
polyfit 2
HPFCutoffHz 0.0109
HeteroGCor 0
nconditions 4
parname xxxx.para
RefEventDur 0.5
timewindow 40.000000
prestim 0
TER 0.050000
gamma 0 8 0.3 0
stimulusdelay -2/2
Condition 1 Condition01
Condition 2 Condition02
Condition 3 Condition03
Condition 4 Condition04
nuisreg motion.dat 6