I don't think FreeSurfer will give any direct measure of MS. In the wiki page of FreeSurfer there's a paper about MS: http://www.nmr.mgh.harvard.edu/~fischl/reprints/Brain2003v126p1734Sailercorticalthickness.pdf

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2009/8/11 Jose Soares <zmsoares@yahoo.com.br>
Hi,

what kind of information can I get with FreeSUrfer about MS lesions? Number of lesions? Lesion volume?

Thanks,

Miguel.


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