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Hi Rosie,

For cortical thickness, check out *.aparc.*.stats files (e.g, lh.aparc.stats, lh.aparc.a2009s.stats, lh.aparc.DKTatlas.stats).  There is more info in the ROI analysis tutorial:

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-Paul


On Mon, Jun 14, 2021 at 10:09 AM Rosalia Dacosta Aguayo <rdacostaa@gmail.com> wrote:

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Dear Freesurfer's experts,

I run FreeSurfer and I got the following stats:

rosalia@rosalia-Lenovo-Y520-15IKBN /media/rosalia/Nuevo_vol/ARTICO/derivatives/freesurfer/sub-003/stats $ ls
aseg.stats               lh.BA_exvivo.thresh.stats  rh.aparc.stats
lh.aparc.a2009s.stats    lh.curv.stats              rh.BA_exvivo.stats
lh.aparc.DKTatlas.stats  lh.w-g.pct.stats           rh.BA_exvivo.thresh.stats
lh.aparc.pial.stats      rh.aparc.a2009s.stats      rh.curv.stats
lh.aparc.stats           rh.aparc.DKTatlas.stats    rh.w-g.pct.stats
lh.BA_exvivo.stats       rh.aparc.pial.stats        wmparc.stats
rosalia@rosalia-Lenovo-Y520-15IKBN /media/rosalia/Nuevo_vol/ARTICO/derivatives/freesurfer/sub-003/stats $

A part from the aseg.stats file, which one should I consider if I am interested in cortical thickness. Should I run any other step for this?

Best,
Rosie


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