Hi Bruce, 

Great, thanks for the quick reply! That worked beautifully. I was apparently using the wrong output option. 
Much appreciated! 

Kind regards,
Tobias
 
_________________________________________ 
Tobias Granberg, MD, PhD 

Post-doctoral research fellow
A.A. Martinos Center for Biomedical Imaging 
Massachusetts General Hospital | Harvard Medical School

Resident in Radiology 
Karolinska Institutet | Department of Clinical Science, Intervention and Technology
Karolinska University Hospital | Department of Radiology


On 21 jul 2016, at 09:35, Bruce Fischl <fischl@nmr.mgh.harvard.edu> wrote:

Hi Tobias

yes, mris_calc should do it. If you give the output extension .mgz it will save in that format instead of curv I believe (and will work fine as an overlay)

cheers
Bruce


On Thu, 21 Jul 2016, Granberg, Erik Tobias wrote:

Hi, 
Is there a way to subtract one surface overlay from another (for example in
fsaverage) and still having the output being an .mgh overlay file? 
I saw that mis_calc does a similar procedure but automatically outputs the result
as out.mgz. 
Thank you for the help! 
Kind regards,
Tobias
 
_________________________________________ 
Tobias Granberg, MD, PhD 
Post-doctoral research fellow
A.A. Martinos Center for Biomedical Imaging 
Massachusetts General Hospital | Harvard Medical School
Resident in Radiology 
Karolinska Institutet | Department of Clinical Science, Intervention and Technology
Karolinska University Hospital | Department of Radiology
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