mri_surfcluster --subject fsaverage --hemi rh --in rh_time_spval.mgh --cwpvalthresh 0.05 --fdr .05 --sign pos --o rh_time_cluster --sum rh_time_cluster_sum thsign = pos, id = 1
version $Id: mri_surfcluster.c,v 1.51.2.3 2012/05/31 22:10:05 greve Exp $
hemi = rh
srcid = rh_time_spval.mgh
srcsubjid = fsaverage
srcsurf = white
srcframe = 0
thsign = pos
thmin = -1
thmax = -1
fdr = 0.05
minarea = 0
xfmfile = talairach.xfm
nth = -1
outid = rh_time_cluster paint
sumfile = rh_time_cluster_sum
subjectsdir = /gpfs/home/jtl190/work/structurals
FixMNI = 1
------------- XFM matrix (RAS2RAS) ---------------
/gpfs/home/jtl190/work/structurals/fsaverage/mri/transforms/talairach.xfm
1.000 0.000 0.000 0.000;
0.000 1.000 0.000 0.000;
0.000 0.000 1.000 0.000;
0.000 0.000 0.000 1.000;
----------------------------------------------------
Reading source surface /gpfs/home/jtl190/work/structurals/fsaverage/surf/rh.white
Done reading source surface
Computing metric properties
Loading source values
number of voxels in search space = 163842
Done loading source values (nvtxs = 163842)
overall max = 1 at vertex 27
overall min = 1.52021e-05 at vertex 125620
surface nvertices 163842
surface area 65020.929688
surface area 65020.765625
Setting voxel-wise threshold with FDR = 0.050000
Assuming input map is -log10(p)
MRISfdr2vwth(): np = 163842, nv = 163842, fdr = 0.05, vwth=1.04576
FDR Voxel-wise threshold is 1.04576
Adjusting threshold for 1-tailed test.
If the input is not a -log10(p) volume, re-run with --no-adjust.
Searching for Clusters ...
thmin=1.045757 (0.744727), thmax=-1.000000 (-1), thsignid=1, minarea=0.000000
Found 9803 clusters
Max cluster size 5993.586426
INFO: fixing MNI talairach coordinates
Saving thresholded output to rh_time_cluster
Can't create file /gpfs/home/jtl190/work/structurals/fsaverage/surf/rh.rh_time_cluster.w
Permission denied