Dear freesurfer experts,

I would like to present invasive electrodes from different subjects in the same template brain.

I thought about doing a volumetric registration (all the electrodes are depth) using mri_cvs_register:

mri_cvs_register --mov {subject} --template {template} --outdir $SUBJECTS_DIR/{template}/mri_cvs_register --step3

And then using mri_vol2vol that'll use the resulting m3z transformation file.

Can I do it for a list of coordinates?


Thanks,

Noam