There was a post in 2015 from Richard Parker talking about using SPM brainmasks instead of the Freesurfer ones. I would like to do this but in some cases I have multiple T1s and I get the motioncor step to make a registered template. What steps do I need to perform to get a brainmask from one of the images into the template space created by motioncor?

 

Apologies if this has already been asked.

 

Chris Adamson
Senior Research Officer
Developmental Imaging
Murdoch Childrens Research Institute
The Royal Children’s Hospital
Flemington Rd Parkville, Victoria 3052 AUS
T: (03) 9936 6780
E: chris.adamson@mcri.edu.au
www.mcri.edu.au

 

 

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