Hi Corinna,
Its been awhile since Ive used Ubuntu12.04. Infact its End of Life date
is 3 days away ;)
Can you please send me the command and the log file which gives the
exact error. Thanks.
-Zeke
On 04/25/2017 01:49 PM, Corinna Bauer wrote:
> Hi Zeke,
>
> I am also having this same problem. Even after completing the steps you
> listed above. I am running Ubuntu 12.04.
>
> Any suggetions?
>
> Thanks
>
> On Wed, May 28, 2014 at 1:50 PM, Z K <zkaufman@nmr.mgh.harvard.edu
> <mailto:zkaufman@nmr.mgh.harvard.edu >> wrote:
>
> You will need to install libboost v1.41 onto your system. You should be
> able to install it using yum:
>
> $>yum install boost-devel
>
> However, its possible that the version you get thru this method may be
> incompatible with the version required by freesurfer. If the above does
> not fix your issue, then download libboost
> (http://www.boost.org/users/history/version_1_41_0.html
> <http://www.boost.org/users/history/version_1_41_0.html >) and untar
> > Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.> it. Then:
>
> >cd libboost_folder
> >mkdir libraries
> >./bootstrap.sh --prefix=./libraries
> >./bjam install
> >cd libraries/lib
> > ln -s libboost_program_options.so.1.41.0
> libboost_program_options.so.5
> >export
> LD_LIBRARY_PATH=.../boost_temp/boost_1_41_0/libraries/ lib:$LD_LIBRARY_PATH
>
> Hope this helps and feel free to contact me if your having issues
> getting it to work.
>
> -Zeke
>
> On 05/28/2014 12:17 PM, Michael Waskom wrote:
> > Hi, I had mri_cvs_register die on me when it couldn't find a shared
> > library. Relevant bit is (full log is attached):
> >
> > mris_resample: error while loading shared libraries:
> > libboost_program_options.so.5: cannot open shared object file: No such
> > file or directory
> >
> > Freesurfer bugr info:
> >
> > --------------------
> >
> > FREESURFER_HOME: /hsgs/software/freesurfer/5.3.0
> >
> > Build stamp: freesurfer-Linux-centos6_x86_64-stable-pub-v5.3.0
> >
> > RedHat release: Red Hat Enterprise Linux Server release 6.3 (Santiago)
> >
> > Kernel info: Linux 2.6.32-358.6.2.el6.x86_64 x86_64
> >
> > ----------------------
> >
> > Any thoughts on how to proceed? Thanks!
> >
> > Michael
> >
> >
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