The easiest way is probably to build an average subject (make_average_subject). This will create ?h.thickness in the surf dir which will be the average across the input subjects. You could also use mris_glm with a design matrix of all 1s. The beta output will then be the average thickness.

Goldman, Aaron (NIH/NIMH) [F] wrote:

Hi, I feel like I used to know this, but how do I make a map of average thickness for a group of subjects? Also, is there a way I can make a similar map showing the variance of thickness values? Thanks,

-Aaron-

Aaron L. Goldman

Post-Bacc IRTA

Genes, Cognition and Psychosis Program, NIMH

Building 10, Room 3C108

Phone: (301) 435-0944

Email: aarong@mail.nih.gov
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