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By visualizing the output by freeview, I found that it was the same of ThalamicNuclei.v10.T1.mgz.

Thanks

Il 11 maggio 2020 alle 2.19 Bruce Fischl < fischl@nmr.mgh.harvard.edu> ha scritto:

Hi Stefano

can you elaborate? Why do you suspect there is an error?

cheers

Bruce

On Mon, 11 May

2020, stdp82@virgilio.it wrote:

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Please, could you check the command line.

I suspect that an error is there.

Thanks.

Stefano

mri_binarize --i ThalamicNuclei.v10.T1.mgz --replace-only 8130   8133 --o

Left-Ventroposterior.mgz

Il 30 aprile 2020 alle 18.51 "Douglas N. Greve"

< dgreve@mgh.harvard.edu> ha scritto:

You can use mri_binarize --i ThalamicNuclei.v10.T1.mgz

--replace-only segid segidreplace ... --o newseg.mgz

to create a new segmentation with merged segments, then using

vol2subfield with the newseg seg as --sf

On 4/29/2020 7:57 PM, stdp82@virgilio.it wrote:

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Hi list,

vol2subfield --i fmcpr.nii.gz --reg register.dof6.lta --sf

ThalamicNuclei.v10.T1.mgz --stats stats.dat --avgwf

avgwf.dat --avgwfvol avgwfvol.mgz --o f2subf.nii.gz

extracts the time course from each thalamic subregions.

If I would like to merge multiple regions (e.g. --id 8115

--id 8116) and extract a single time course from them,

which is the way?

Thanks

Stefano

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