I’ve tested a few different (large) sets of subject data and still been unable to replicate this problem, so tough to say what’s causing it. Are you using the make_average_subject 6.0.0-patch? Have you also tried running the command with a subgroup containing the other 56 subjects (maybe it’s a particular subject that’s causing this)?

best,
Andrew

On Nov 28, 2017, at 12:20 PM, Sofia Rodriguez Penuela <srodpen@upo.es> wrote:

Hi,


User M del Mar and me belong to same investigation group, so the problem is common. We have 116 subjects and we detected this trouble. However, we tried to repeat the make_average_subject command using a subgroup (only 60 subjects) and label files were correctly created. Maybe, number of subjetcs is the key. Nevertheless, with Freesurfer 5.3 we haven't this problem, no matter number of subjects.


Best,


Sofia

--
Sofía Rodríguez Peñuela, Técnico de Laboratorio.
Laboratorio de Neurociencia Funcional
Departamento de Fisiología, Anatomía y Biología Celular.
Universidad Pablo de Olavide
Ctra. de Utrera, Km.1
41013 - Sevilla
- España -
Movil: 627273085
Email: srodpen@upo.es
http://www.upo.es/neuroaging/es/
_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer