Dear Dr. Yeo,

Thanks a lot for sending this information. I tried to view the parcels using colortable but somehow I do not see postfix in FreeView window. Could you please send me the command line how can I load the parcels on freeview with associated colortable? I would really appreciate your help.

(1). In the mean time, I found this paper: Aberrant cerebellar connectivity in motor and association networks in schizophrenia (https://doi.org/10.3389/fnhum.2015.00134)
In this paper, in figure 1, details of cortical areas are given for 17 networks. I was wondering if I can use these areas and report in my 7 network analysis e.g. for default mode network in 7 network atlas, can I report all the areas in networks 14, 15, 16 and 17 in 17 network atlas. Similarly, for frontoparietal network in 7 network atlas, can I report all the areas in control networks 11, 12 and 13 in 17 network atlas, and so on for other networks. If I can do that, then what would be the best citation for that?

(2). Or I can't do like I described in step #1 above and I can report only the areas which you referred in zip folder, which I specified in my previous email.

Thanks a lot for your time and help.

On Wed, Oct 18, 2017 at 6:06 PM, Thomas Yeo <ythomas@csail.mit.edu> wrote:
Hi Martin,

Those postfix are based on anatomical location. If you load the parcels on freeview with the associated colortable, you should be able to infer what the postfix are referring to. 

Off the top of my head (but you should double check by loading on freeview):

1) FrOper = frontal operculum

2) PFCl = Prefrontal Cortex Lateral 

3) FEF = frontal eye fields

4) ParOper = parietal operculum

5) TempOcc = temporal occipital

6) PHC = parahippocampal complex

7) PFCmp = I think mp stands for medial posterior, but I am not super sure, you probably want to visualize this and double check.

Thanks,
Thomas

On Thu, Oct 19, 2017 at 1:16 AM, Martin Juneja <mj70481@gmail.com> wrote:
Dear Dr. Yeo,

Thanks a lot for your reply.
Actually, I have already analyzed the effect of treatment on these 7 functional networks. I just want to report what are the areas which constitute each of these network.

Somehow in the reference you sent, I could not find name of each regions of interest which are part of these networks. In the zip folder you sent, I found following information. Is there a way I can still get full name of ROIs e.g. here I do not know FrOper, PFCI etc.

I would really appreciate any help.

Thanks !

Network 1:
1                         7Networks_LH_Vis 120  18 134   0

Network 2:
  2                      7Networks_LH_SomMot  70 130 180   0

Network 3:
  3               7Networks_LH_DorsAttn_Post   0 118  14   0
  4                7Networks_LH_DorsAttn_FEF   0 118  15   0
  5               7Networks_LH_DorsAttn_PrCv   0 119  14   0

Network 4:
  6         7Networks_LH_SalVentAttn_ParOper 196  58 250   0
  7         7Networks_LH_SalVentAttn_TempOcc 196  58 251   0
  8          7Networks_LH_SalVentAttn_FrOper 196  59 250   0
  9            7Networks_LH_SalVentAttn_PFCl 196  59 251   0
 10             7Networks_LH_SalVentAttn_Med 197  58 250   0

Network 5:
 11                  7Networks_LH_Limbic_OFC 220 248 164   0
 12             7Networks_LH_Limbic_TempPole 220 248 165   0

Network 6:
 13                    7Networks_LH_Cont_Par 230 148  34   0
 14                   7Networks_LH_Cont_Temp 230 148  35   0
 15                   7Networks_LH_Cont_PFCd 230 149  34   0
 16                   7Networks_LH_Cont_PFCl 230 149  35   0
 17                    7Networks_LH_Cont_OFC 231 148  34   0
 18                   7Networks_LH_Cont_PFCv 231 148  35   0
 19                   7Networks_LH_Cont_pCun 231 149  34   0
 20                   7Networks_LH_Cont_Cing 231 149  35   0
 21                  7Networks_LH_Cont_PFCmp 230 148  33   0

Network 7:
 22                 7Networks_LH_Default_Par 205  62  78   0
 23                7Networks_LH_Default_Temp 205  62  79   0
 24                 7Networks_LH_Default_PFC 205  63  78   0
 25                 7Networks_LH_Default_PCC 205  63  79   0
 26                 7Networks_LH_Default_PHC 206  62  78   0


On Wed, Oct 18, 2017 at 6:44 AM, Thomas Yeo <ythomas@csail.mit.edu> wrote:
Hi Martin,

We have previously split the networks into 114 regions: https://www.dropbox.com/s/yj1gbpmpgho7wtm/Yeo_JNeurophysiol11_SplitLabels.zip?dl=0 . See Figure 1 in the first reference below. If you decide to use these regions, please kindly cite the following papers:

1) Yeo BTT, Tandi J, Chee MWL. Functional connectivity during rested wakefulness predicts vulnerability to sleep deprivation. Neuroimage 111:147-158, 2015

2) Krienen FM, Yeo BTT, Buckner RL. Reconfigurable state-dependent functional coupling modes cluster around a core functional architecture. Philosophical Transactions of the Royal Society B, 369:20130526, 2014

Thanks,
Thomas

On Wed, Oct 18, 2017 at 3:48 AM, Martin Juneja <mj70481@gmail.com> wrote:
Hi experts,

I am using Yeo atlas (7 networks) in my analysis. Where can I find name of all the regions involved in each of these 7 networks in Yeo atlas?

Thanks.

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