That's weird, people upload their recon-all.log files all the time. Was
the email kicked back to you?

On 06/06/2013 03:27 PM, Erin Browning wrote:
> The log file for recon-all is too large. How should I send it?
>
>
> On Thu, Jun 6, 2013 at 1:48 PM, Douglas N Greve

> <greve@nmr.mgh.harvard.edu <mailto:greve@nmr.mgh.harvard.edu>> wrote:
>
>     Hi Erin, thanks for reposting. Can you post the recon-all.log file?
>     doug
>
>
>     On 06/06/2013 02:37 PM, Erin Browning wrote:
>     > Hi everyone--
>     >
>     > I emailed the other day about hyperintensity after running
>     motioncor.
>     > We've skipped motioncor in our processing now, but we keep getting
>     > this error while running AR2.
>     >
>     > \n mri_ca_register -invert-and-save transforms/talairach.m3z \n
>     > mri passed volume size is different from the one used to create
>     M3D data
>     > Loading, Inverting, Saving, Exiting ...
>     > Reading transforms/talairach.m3z
>     > gunzip -c transforms/talairach.m3z
>     > Inverting GCAM
>     > ERROR: mri_ca_register with non-zero status 0
>     > Darwin cerebrum.uwm.edu <http://cerebrum.uwm.edu>
>     <http://cerebrum.uwm.edu> 10.8.0 Darwin Kernel
>     > Version 10.8.0: Tue Jun  7 16:33:36 PDT 2011;
>     > root:xnu-1504.15.3~1/RELEASE_I386 i386
>     > recon-all -s freesurfer exited with ERRORS at Wed Jun  5
>     19:32:56 CDT 2013
>     >
>     > I tried rerunning recon-all -s freesurfer -talairach before running
>     > AR2, and that didn't fix the error. What's going wrong?
>     >
>     > Thanks,
>     > Erin Browning
>     >
>     >
>     >
>     > _______________________________________________
>     > Freesurfer mailing list
>     > Freesurfer@nmr.mgh.harvard.edu

>     <mailto:Freesurfer@nmr.mgh.harvard.edu>

>     > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
>
>     --
>     Douglas N. Greve, Ph.D.
>     MGH-NMR Center

>     greve@nmr.mgh.harvard.edu <mailto:greve@nmr.mgh.harvard.edu>

>     Phone Number: 617-724-2358
>     Fax: 617-726-7422
>
>     Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting

>     <http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting>
>     FileDrop: https://gate.nmr.mgh.harvard.edu/filedrop2
>     www.nmr.mgh.harvard.edu/facility/filedrop/index.html
>     <http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html>

>     Outgoing:
>     ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/
>
>     _______________________________________________
>     Freesurfer mailing list

>     Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>

>     https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
>
>
>     The information in this e-mail is intended only for the person to
>     whom it is
>     addressed. If you believe this e-mail was sent to you in error and
>     the e-mail
>     contains patient information, please contact the Partners
>     Compliance HelpLine at
>     http://www.partners.org/complianceline . If the e-mail was sent to
>     you in error
>     but does not contain patient information, please contact the
>     sender and properly
>     dispose of the e-mail.
>
>
>
>
> _______________________________________________
> Freesurfer mailing list
> Freesurfer@nmr.mgh.harvard.edu
> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer

--
Douglas N. Greve, Ph.D.
MGH-NMR Center
greve@nmr.mgh.harvard.edu
Phone Number: 617-724-2358
Fax: 617-726-7422

Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting
FileDrop: https://gate.nmr.mgh.harvard.edu/filedrop2
www.nmr.mgh.harvard.edu/facility/filedrop/index.html
Outgoing: ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/

_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer