External Email - Use Caution        

So, you mean to say that two volumes need to be exactly same kind and having same information? 
So I have generated a skull foramina model(which is triangular mesh) from the fixed image volume. Now I want to register the model with a general patient data volume. But mesh and volume cannot be registered so that I am trying to register the two volumes so that the model will warp on to the patient data perfectly. 

regards
Shrabani Ghosh

On Fri, Jun 21, 2019 at 12:06 PM Bruce Fischl <fischl@nmr.mgh.harvard.edu> wrote:
not unless you also have an image of the whole brain. Even then I'm not
sure it will do what you want, although I'm still not clear on exactly what
you are doing. Registering one image of the skull to a model? Why?

On Fri, 21 Jun
2019, Shrabani Ghosh wrote:

>
>         External Email - Use Caution        
>
> These are skull images of axial representation. Can't I use freesurfer? Because here interpolation
> is important. 
>
> On Fri, Jun 21, 2019 at 11:58 AM Bruce Fischl <fischl@nmr.mgh.harvard.edu> wrote:
>       Hi Shrabani
>
>       I'm not even sure what these are images of. If you are looking for
>       general-purpose registration tools you can try ANTS or something like that.
>
>       cheers
>       Bruce
>
>
>       On Fri, 21 Jun 2019, Shrabani
>       Ghosh wrote:
>
>       >
>       >         External Email - Use Caution        
>       >
>       > The fixed volume is my model volume and the other is a patient volume (moving )that I
>       want to fit
>       > and to the fixed volume. They are different in size and they have to be perfectly
>       aligned. Please
>       > guide me on how to do the registration. 8.png is the model volume. 
>       > 9.png is the patient volume. 
>       > 10.png is the outline of their size. the smaller one is the moving image and the
>       bigger one is the
>       > fixed image. 
>       >
>       > On Fri, Jun 21, 2019 at 10:22 AM Bruce Fischl <fischl@nmr.mgh.harvard.edu> wrote:
>       >       what kinds of volumes are they and why are you registering them?
>       >       cheers
>       >       Bruce
>       >       On Thu, 20
>       >       Jun 2019, Shrabani Ghosh wrote:
>       >
>       >       >
>       >       >         External Email - Use Caution        
>       >       >
>       >       > Hi freesurfer,
>       >       > I want to do registration on two image volumes nifti file. What are the
>       commands I
>       >       have to use to do
>       >       > the registration?
>       >       >
>       >       > Shrabani Ghosh
>       >       >
>       >       >_______________________________________________
>       >       Freesurfer mailing list
>       >       Freesurfer@nmr.mgh.harvard.edu
>       >       https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
>       >
>       >
>       >_______________________________________________
>       Freesurfer mailing list
>       Freesurfer@nmr.mgh.harvard.edu
>       https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
>
>
>_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer