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Dear all,

As evidently experienced by others, a certain percentage of subjects failed to run on freesurfer 7.1 version, stopping at the segmentation step, while they could run in version 6.

I read that this is bug is present in Mac os, which I am using (high sierra). I tried to fix it, as advised, using the following lines of code suggested:

cd $FREESURFER_HOME/bin
sudo rm rca-long-tp-init
sudo curl https://raw.githubusercontent.com/freesurfer/freesurfer/dev/scripts/rca-long-tp-init -o rca-long-tp-init sudo chmod +x rca-long-tp-init

The first line seems to work. However, I get the following errors when runnding the lines from sudo curl:

anneliess-ipro:bin k6-anneva1-s$ sudo curl https://raw.githubusercontent.com/freesurfer/freesurfer/dev/scripts/rca-long-tp-init -o rca-long-tp-init sudo chmod +x rca-long-tp-init

  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current

                                 Dload  Upload   Total   Spent    Left  Speed

100 13012  100 13012    0     0  35881      0 --:--:-- --:--:-- --:--:-- 35944

curl: (6) Could not resolve host: sudo

curl: (6) Could not resolve host: chmod

curl: (6) Could not resolve host: +x

curl: (6) Could not resolve host: rca-long-tp-init


I had already given my sudo password in the first step. I might be doing something very basic wrong. Could somebody help?

Thanks!

Annelies


Annelies van't Westeinde | PHD Candidate
Department of Women's and Children's Health | Karolinska Institutet
171 77 Solna | Karolinskavägen 37A
+46 760967499
annelies.vant.westeinde@ki.se ki.se
______________________________________
Karolinska Institutet – a medical university



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