Dear surfers,

I am trying to measure the distance between two activated vertices...

Now, I run "mris_pmake --optionsFile=options.txt"

and here is the options.txt file below ************,

But I did not get any result on the window or ./ores.log file...

How can I get the result from mris_pmake ?

Thanks in advance.

Hyungjun Kim (Korea Institute of Oriental Medicine)

*******************

#
# auto-generated optionsFile
#

# Input surfaces and curvature functions
surfaceFile                              = /mnt/data1/subjects/csm0928/surf/lh.inflated
auxSurfaceFile                           = /mnt/data1/subjects/csm0928/surf/lh.smoothwm
curvatureFile                            = /mnt/data1/subjects/csm0928/surf/lh.smoothwm.H.crv
sulcalHeightFile                         = /mnt/data1/subjects/csm0928/surf/lh.sulc

# Start and End vertices

startVertex                              = 1803
endVertex                                = 44765

# Control flags and settings
controlPort                              = 1701
timeoutSec                               = 60
b_transitionPenalties                    = 0
b_syslogPrepend                          = 1
b_patchFile_save                         = 0
b_labelFile_save                         = 1
b_useAbsCurvs                            = 0
b_exitOnDone                             = 1
b_costPathSave                           = 0

# Output file names and file stems
costFile                                 = cost.txt
patchFile                                = dijk
labelFile                                = dijk
labelFileAuxSurface                      = dijkAuxSurface

# Messaging channels
userMessages                             = ./user_msg.log
sysMessages                              = ./osys.log
resultMessages                           = ./ores.log

# Weights
wd                                       = 1.000000
wc                                       = 0.000000
wh                                       = 0.000000
wdc                                      = 0.000000
wdh                                      = 0.000000
wch                                      = 0.000000
wdch                                     = 0.000000
wdir                                     = 0.000000

# Transitional penality weights
Dwd                                      = 1.000000
Dwc                                      = 1.000000
Dwh                                      = 1.000000
Dwdc                                     = 1.000000
Dwdh                                     = 1.000000
Dwch                                     = 1.000000
Dwdch                                    = 1.000000
Dwdir                                    = 1.000000

# mpmProg
mpmProgID                                = 2
mpmArgs                                  = startVertex:1803,endVertex:44765
costCurvFile                             = lh.autodijk.crv

# mpmOverlay
mpmOverlayID                             = 3

# Debugging -- change at your own risk!
b_mpmProgUse                             = 1
b_mpmOverlayUse                          = 0