Hello all,

I have a need to generate LH and RH WM masks for analysis.

I can convert aseg.mgz to aseg.nii but the dims are 256x256x256

and I need to use the FSL MNI format which is 182x218x182.

Is there a recipe for cropping / translating etc to match the aseg.mgz

atlas with the FSL atlases?

Thanks

-roddy

UT Southwestern Medical Center
The future of medicine, today.