You are using a development build from 20190911. Why? Please replicate with one of the officially released versions of FS. We do not recommend using development versions expcept in very special cases.

On 6/24/2022 10:33 AM, 김다운 wrote:

        External Email - Use Caution        

this is my recon-all.log file 

thnx.

보낸 사람: Douglas N. Greve <dgreve@MGH.HARVARD.EDU> 대신 freesurfer-bounces@nmr.mgh.harvard.edu <freesurfer-bounces@nmr.mgh.harvard.edu>
보낸 날짜: 2022년 6월 24일 금요일 오후 11:31
받는 사람: freesurfer@nmr.mgh.harvard.edu <freesurfer@nmr.mgh.harvard.edu>
제목: Re: [Freesurfer] ERROR : mri_ca_register with non-zero status 15
 
Can you send the recon-all.log file?

On 6/21/2022 6:44 AM, 김다운 wrote:

        External Email - Use Caution        

Hello FreeSurfer Develops,

I'm attempting to run recon-all on two single subject with T1.
However, I got the following error message for subject respectively: 

================================================================
ERROR : mri_ca_register with non-zero status 15
but continuing despite the error

...

ERROR : cannot find or read transform/talairach.m3z
I have attached the recon-all.log in case it's of any use.
=================================================================
my commend code

#!/bin/bash
#SBATCH -N 1 # Number of Nodes required
#SBATCH -c 8 # Number of threads
#SBATCH -t 0-10:00:00 # Amount of time needed DD-HH:MM:SS
#SBATCH -p shared # Partition to submit to
#SBATCH --mem-per-cpu=8GB #Memory per cpu
export OMP_NUM_THREADS=$SLURM_CPUS_PER_TASK
module load freesurfer
export FS_LICENSE=$HOME/license.txt
export SUBJECTS_DIR=~/DWKIM/T1/00sample
recon-all -i s3001.nii -s s3001 -parallel -openmp 8 -all -qcache
==================================================================
FreeSurfer Version : freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.0-2beb96c
Platform : CentOS Linux ver.7
uname -a : Linux holylogin04.rc.fas.harvard.edu 3.10.0-1160.36.2.e17.x86_64 #1 SMP Wed Jul 21 11:57:15 UTC 2021 x86_64 x86 64 x86_64 GNU/Linux


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