Thank you very much Eugenio.<div><br></div><div>Additionally I'm noting these file in dmri folder. Please, may you tell me if their location is correct.</div><div><br></div><div><div>/home/stefano/Desktop/bedp/dmri/mni</div><div>/home/stefano/Desktop/bedp/dmri/xfms</div><div>/home/stefano/Desktop/bedp/dmri/brain_anat.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/brain_anat_orig.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/bvals</div><div>/home/stefano/Desktop/bedp/dmri/bvecs</div><div>/home/stefano/Desktop/bedp/dmri/data_slice_0000.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/data_slice_0001.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/data_slice_0002.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/data_slice_0003.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/data_slice_0004.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/data_slice_0005.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/data_slice_0006.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/data_slice_0007.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/data_slice_0008.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/data_slice_0009.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/data_slice_0010.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/data_slice_0011.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/data_slice_0012.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/data_slice_0013.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/data_slice_0014.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/data_slice_0015.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/data_slice_0016.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/data_slice_0017.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/data_slice_0141.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/data_slice_0142.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/data_slice_0143.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/data_slice_0144.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/data_slice_0145.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/data_slice_0146.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/data_slice_0147.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/data_slice_0148.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/data_slice_0149.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/data_slice_0150.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/data_slice_0151.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/data_slice_0152.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/data_slice_0153.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/data_slice_0154.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/data_slice_0155.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/data_slice_0156.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/data_slice_0157.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/data_slice_0158.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/data_slice_0159.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/data_slice_0160.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/data_slice_0161.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/data_slice_0162.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/data_slice_0163.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/data_slice_0164.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/data_slice_0165.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/data_slice_0166.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/data_slice_0167.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/data_slice_0168.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/data_slice_0169.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/data_slice_0170.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/data_slice_0171.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/data_slice_0172.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/data_slice_0173.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/data_slice_0174.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/data_slice_0175.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/data_slice_0176.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/data_slice_0177.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/data_slice_0178.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/data_slice_0179.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/data_slice_0180.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/data_slice_0181.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/dwi.ecclog</div><div>/home/stefano/Desktop/bedp/dmri/dwi_orig.mghdti.bvals</div><div>/home/stefano/Desktop/bedp/dmri/dwi_orig.mghdti.bvecs</div><div>/home/stefano/Desktop/bedp/dmri/dwi_snr.txt</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0000.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0001.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0002.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0003.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0004.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0005.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0006.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0007.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0008.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0009.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0010.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0011.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0012.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0013.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0014.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0015.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0016.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0017.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0018.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0019.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0020.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0021.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0022.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0023.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0024.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0025.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0026.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0027.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0028.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0029.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0030.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0031.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0032.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0033.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0034.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0035.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0036.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0037.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0038.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0039.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0040.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0041.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0042.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0043.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0044.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0045.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0046.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0047.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0048.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0049.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0050.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0051.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0052.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0053.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0054.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0055.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0056.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0057.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0058.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0059.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0060.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0061.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0062.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0063.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0064.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0065.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0066.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0067.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0068.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0069.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0070.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0071.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0072.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0073.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0074.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0075.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0076.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0077.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0078.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0079.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0080.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0081.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0082.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0083.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0084.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0085.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0086.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0087.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0088.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0089.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0090.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0091.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0092.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0093.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0094.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0095.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0096.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0097.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0098.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0099.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0100.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0101.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0102.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0103.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0104.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0105.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0106.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0107.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0108.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0109.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0110.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0111.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0112.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0113.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0114.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0115.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0116.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0117.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0118.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0119.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0120.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0121.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0122.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0123.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0124.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0125.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0126.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0127.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0128.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0129.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0130.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0131.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0132.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0133.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0134.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_brain_mask_slice_0135.nii.gz</div><div>/home/stefano/Desktop/bedp/dmri/nodif_b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----Messaggio originale----<br>Da: iglesias@nmr.mgh.harvard.edu<br>Data: 13-feb-2013 15.18<br>A: &lt;stdp82@virgilio.it&gt;<br>Cc: &lt;freesurfer@nmr.mgh.harvard.edu&gt;, &lt;ayendiki@nmr.mgh.harvard.edu&gt;<br>Ogg: Re: [Freesurfer] R: Re: R: Re: R: R: Re: R: trac-all -path error<br><br>Hi Stefano,<br><br>Question:<br>https://mail.nmr.mgh.harvard.edu/pipermail/freesurfer/2012-August/025298.html<br><br>Answer:<br>https://mail.nmr.mgh.harvard.edu/pipermail/freesurfer/2012-August/025303.html<br><br>Hope this helps!<br><br>/Eugenio<br><br><br><br><br>On Wed, 2013-02-13 at 08:27 +0100, stdp82@virgilio.it wrote:<br>&gt; Hi Anastasia,<br>&gt; <br>&gt; <br>&gt; I have run another subject with the same error.<br>&gt; After finish bedposts<br>&gt; Queuing post processing stage<br>&gt; [iMac-di-Stefano:freesurfer/subjects/subject_prova] Stefano% trac-all<br>&gt; -path -c $FREESURFER_HOME/dmrirc_single_subject5<br>&gt; INFO: SUBJECTS_DIR is /Applications/freesurfer/subjects/subject_prova<br>&gt; INFO: Diffusion root<br>&gt; is /Applications/freesurfer/subjects/subject_prova<br>&gt; Actual FREESURFER_HOME /Applications/freesurfer<br>&gt; trac-paths<br>&gt; -c /Applications/freesurfer/subjects/subject_prova/Con05/scripts/dmrirc.local -log /Applications/freesurfer/subjects/subject_prova/Con05/scripts/trac-all.log -cmd /Applications/freesurfer/subjects/subject_prova/Con05/scripts/trac-all.cmd<br>&gt; #-------------------------------------<br>&gt; /Applications/freesurfer/bin/trac-paths <br>&gt; #-------------------------------------<br>&gt; #@# Path reconstruction Wed Feb 13 08:20:51 CET 2013<br>&gt; /Applications/freesurfer/bin/dmri_paths<br>&gt; --outdir /Applications/freesurfer/subjects/subject_prova/Con05/dpath/5cpts/priormni/seg14/initmni/regflt/lh.cst_AS_avg33_mni_flt /Applications/freesurfer/subjects/subject_prova/Con05/dpath/5cpts/priormni/seg14/initmni/regflt/rh.cst_AS_avg33_mni_flt /Applications/freesurfer/subjects/subject_prova/Con05/dpath/5cpts/priormni/seg14/initmni/regflt/lh.ilf_AS_avg33_mni_flt /Applications/freesurfer/subjects/subject_prova/Con05/dpath/5cpts/priormni/seg14/initmni/regflt/rh.ilf_AS_avg33_mni_flt /Applications/freesurfer/subjects/subject_prova/Con05/dpath/5cpts/priormni/seg14/initmni/regflt/lh.unc_AS_avg33_mni_flt /Applications/freesurfer/subjects/subject_prova/Con05/dpath/5cpts/priormni/seg14/initmni/regflt/rh.unc_AS_avg33_mni_flt /Applications/freesurfer/subjects/subject_prova/Con05/dpath/5cpts/priormni/seg14/initmni/regflt/fmajor_PP_avg33_mni_flt /Applications/freesurfer/subjects/subject_prova/Con05/dpath/5cpts/priormni/seg14/initmni/regflt/fminor_PP_avg33_mni_flt /Applications/freesurfer/su<br>bjects/subject_prova/Con05/dpath/5cpts/priormni/seg14/initmni/regflt/lh.atr_PP_avg33_mni_flt /Applications/freesurfer/subjects/subject_prova/Con05/dpath/5cpts/priormni/seg14/initmni/regflt/rh.atr_PP_avg33_mni_flt /Applications/freesurfer/subjects/subject_prova/Con05/dpath/5cpts/priormni/seg14/initmni/regflt/lh.cab_PP_avg33_mni_flt /Applications/freesurfer/subjects/subject_prova/Con05/dpath/5cpts/priormni/seg14/initmni/regflt/rh.cab_PP_avg33_mni_flt /Applications/freesurfer/subjects/subject_prova/Con05/dpath/5cpts/priormni/seg14/initmni/regflt/lh.ccg_PP_avg33_mni_flt /Applications/freesurfer/subjects/subject_prova/Con05/dpath/5cpts/priormni/seg14/initmni/regflt/rh.ccg_PP_avg33_mni_flt /Applications/freesurfer/subjects/subject_prova/Con05/dpath/5cpts/priormni/seg14/initmni/regflt/lh.slfp_PP_avg33_mni_flt /Applications/freesurfer/subjects/subject_prova/Con05/dpath/5cpts/priormni/seg14/initmni/regflt/rh.slfp_PP_avg33_mni_flt /Applications/freesurfer/subjects/subject_prova/Con05/dpath/5cp<br>ts/priormni/seg14/initmni/regflt/lh.slft_PP!<br> _avg33_m<br>ni_flt /Applications/freesurfer/subjects/subject_prova/Con05/dpath/5cpts/priormni/seg14/initmni/regflt/rh.slft_PP_avg33_mni_flt --dwi /Applications/freesurfer/subjects/subject_prova/Con05/dmri/dwi.nii.gz --grad /Applications/freesurfer/subjects/subject_prova/Con05/dmri/bvecs --bval /Applications/freesurfer/subjects/subject_prova/Con05/dmri/bvals --mask /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/diff/aparc+aseg_mask.bbr.nii.gz --bpdir /Applications/freesurfer/subjects/subject_prova/Con05/dmri.bedpostX --ntr 2 --fmin 0.05 --roi1 /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.cst_AS_avg33_mni_flt_end1_dil.nii.gz /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.cst_AS_avg33_mni_flt_end1_dil.nii.gz /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.ilf_AS_avg33_mni_flt_end1_dil.nii.gz /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.ilf_AS_avg33_mni_flt_end1_dil.nii.gz /Applications/freesurfer/su<br>bjects/subject_prova/Con05/dlabel/mni/lh.unc_AS_avg33_mni_flt_end1_dil.nii.gz /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.unc_AS_avg33_mni_flt_end1_dil.nii.gz /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/fmajor_PP_avg33_mni_flt_end1_dil.nii.gz /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/fminor_PP_avg33_mni_flt_end1_dil.nii.gz /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.atr_PP_avg33_mni_flt_end1_dil.nii.gz /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.atr_PP_avg33_mni_flt_end1_dil.nii.gz /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.cab_PP_avg33_mni_flt_end1_dil.nii.gz /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.cab_PP_avg33_mni_flt_end1_dil.nii.gz /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.ccg_PP_avg33_mni_flt_end1_dil.nii.gz /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.ccg_PP_avg33<br>_mni_flt_end1_dil.nii.gz /Applications/free!<br> surfer/s<br>ubjects/subject_prova/Con05/dlabel/mni/lh.slfp_PP_avg33_mni_flt_end1_dil.nii.gz /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.slfp_PP_avg33_mni_flt_end1_dil.nii.gz /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.slft_PP_avg33_mni_flt_end1_dil.nii.gz /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.slft_PP_avg33_mni_flt_end1_dil.nii.gz --roi2 /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.cst_AS_avg33_mni_flt_end2_dil.nii.gz /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.cst_AS_avg33_mni_flt_end2_dil.nii.gz /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.ilf_AS_avg33_mni_flt_end2_dil.nii.gz /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.ilf_AS_avg33_mni_flt_end2_dil.nii.gz /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.unc_AS_avg33_mni_flt_end2_dil.nii.gz /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.<br>unc_AS_avg33_mni_flt_end2_dil.nii.gz /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/fmajor_PP_avg33_mni_flt_end2_dil.nii.gz /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/fminor_PP_avg33_mni_flt_end2_dil.nii.gz /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.atr_PP_avg33_mni_flt_end2_dil.nii.gz /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.atr_PP_avg33_mni_flt_end2_dil.nii.gz /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.cab_PP_avg33_mni_flt_end2_dil.nii.gz /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.cab_PP_avg33_mni_flt_end2_dil.nii.gz /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.ccg_PP_avg33_mni_flt_end2_dil.nii.gz /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.ccg_PP_avg33_mni_flt_end2_dil.nii.gz /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.slfp_PP_avg33_mni_flt_end2_dil.nii.gz /Applications/f<br>reesurfer/subjects/subject_prova/Con05/dlab!<br> el/mni/r<br>h.slfp_PP_avg33_mni_flt_end2_dil.nii.gz /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.slft_PP_avg33_mni_flt_end2_dil.nii.gz /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.slft_PP_avg33_mni_flt_end2_dil.nii.gz --reg /Applications/freesurfer/subjects/subject_prova/Con05/dmri/xfms/diff2mni.flt.mat --init /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/diff/lh.cst_AS_avg33_mni_flt_cpts_5.txt /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/diff/rh.cst_AS_avg33_mni_flt_cpts_5.txt /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/diff/lh.ilf_AS_avg33_mni_flt_cpts_5.txt /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/diff/rh.ilf_AS_avg33_mni_flt_cpts_5.txt /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/diff/lh.unc_AS_avg33_mni_flt_cpts_5.txt /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/diff/rh.unc_AS_avg33_mni_flt_cpts_5.txt /Applications/freesurfer/subjects/subject_prov<br>a/Con05/dlabel/diff/fmajor_PP_avg33_mni_flt_cpts_5.txt /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/diff/fminor_PP_avg33_mni_flt_cpts_5.txt /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/diff/lh.atr_PP_avg33_mni_flt_cpts_5.txt /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/diff/rh.atr_PP_avg33_mni_flt_cpts_5.txt /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/diff/lh.cab_PP_avg33_mni_flt_cpts_5.txt /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/diff/rh.cab_PP_avg33_mni_flt_cpts_5.txt /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/diff/lh.ccg_PP_avg33_mni_flt_cpts_5.txt /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/diff/rh.ccg_PP_avg33_mni_flt_cpts_5.txt /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/diff/lh.slfp_PP_avg33_mni_flt_cpts_5.txt /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/diff/rh.slfp_PP_avg33_mni_flt_cpts_5.txt /Applications/freesurfer/subject<br>s/subject_prova/Con05/dlabel/diff/lh.slft_P!<br> P_avg33_<br>mni_flt_cpts_5.txt /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/diff/rh.slft_PP_avg33_mni_flt_cpts_5.txt --nprior /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.cst_AS_avg33_mni_flt_fsnnprior /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.cst_AS_avg33_mni_flt_fsnnids /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.cst_AS_avg33_mni_flt_fsnnprior /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.cst_AS_avg33_mni_flt_fsnnids /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.ilf_AS_avg33_mni_flt_fsnnprior /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.ilf_AS_avg33_mni_flt_fsnnids /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.ilf_AS_avg33_mni_flt_fsnnprior /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.ilf_AS_avg33_mni_flt_fsnnids /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.unc_AS_avg33_mni<br>_flt_fsnnprior /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.unc_AS_avg33_mni_flt_fsnnids /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.unc_AS_avg33_mni_flt_fsnnprior /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.unc_AS_avg33_mni_flt_fsnnids /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/fmajor_PP_avg33_mni_flt_fsnnprior /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/fmajor_PP_avg33_mni_flt_fsnnids /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/fminor_PP_avg33_mni_flt_fsnnprior /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/fminor_PP_avg33_mni_flt_fsnnids /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.atr_PP_avg33_mni_flt_fsnnprior /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.atr_PP_avg33_mni_flt_fsnnids /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.atr_PP_avg33_mni_flt_fsnnprior /Ap<br>plications/freesurfer/subjects/subject_prov!<br> a/Con05/<br>dlabel/mni/rh.atr_PP_avg33_mni_flt_fsnnids /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.cab_PP_avg33_mni_flt_fsnnprior /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.cab_PP_avg33_mni_flt_fsnnids /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.cab_PP_avg33_mni_flt_fsnnprior /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.cab_PP_avg33_mni_flt_fsnnids /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.ccg_PP_avg33_mni_flt_fsnnprior /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.ccg_PP_avg33_mni_flt_fsnnids /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.ccg_PP_avg33_mni_flt_fsnnprior /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.ccg_PP_avg33_mni_flt_fsnnids /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.slfp_PP_avg33_mni_flt_fsnnprior /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.slf<br>p_PP_avg33_mni_flt_fsnnids /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.slfp_PP_avg33_mni_flt_fsnnprior /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.slfp_PP_avg33_mni_flt_fsnnids /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.slft_PP_avg33_mni_flt_fsnnprior /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.slft_PP_avg33_mni_flt_fsnnids /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.slft_PP_avg33_mni_flt_fsnnprior /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.slft_PP_avg33_mni_flt_fsnnids --lprior /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.cst_AS_avg33_mni_flt_fsprior /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.cst_AS_avg33_mni_flt_fsids /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.cst_AS_avg33_mni_flt_fsprior /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.cst_AS_avg3<br>3_mni_flt_fsids /Applications/freesurfer/su!<br> bjects/s<br>ubject_prova/Con05/dlabel/mni/lh.ilf_AS_avg33_mni_flt_fsprior /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.ilf_AS_avg33_mni_flt_fsids /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.ilf_AS_avg33_mni_flt_fsprior /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.ilf_AS_avg33_mni_flt_fsids /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.unc_AS_avg33_mni_flt_fsprior /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.unc_AS_avg33_mni_flt_fsids /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.unc_AS_avg33_mni_flt_fsprior /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.unc_AS_avg33_mni_flt_fsids /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/fmajor_PP_avg33_mni_flt_fsprior /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/fmajor_PP_avg33_mni_flt_fsids /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/fminor_P<br>P_avg33_mni_flt_fsprior /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/fminor_PP_avg33_mni_flt_fsids /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.atr_PP_avg33_mni_flt_fsprior /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.atr_PP_avg33_mni_flt_fsids /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.atr_PP_avg33_mni_flt_fsprior /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.atr_PP_avg33_mni_flt_fsids /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.cab_PP_avg33_mni_flt_fsprior /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.cab_PP_avg33_mni_flt_fsids /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.cab_PP_avg33_mni_flt_fsprior /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.cab_PP_avg33_mni_flt_fsids /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.ccg_PP_avg33_mni_flt_fsprior /Applications/<br>freesurfer/subjects/subject_prova/Con05/dla!<br> bel/mni/<br>lh.ccg_PP_avg33_mni_flt_fsids /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.ccg_PP_avg33_mni_flt_fsprior /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.ccg_PP_avg33_mni_flt_fsids /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.slfp_PP_avg33_mni_flt_fsprior /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.slfp_PP_avg33_mni_flt_fsids /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.slfp_PP_avg33_mni_flt_fsprior /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.slfp_PP_avg33_mni_flt_fsids /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.slft_PP_avg33_mni_flt_fsprior /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.slft_PP_avg33_mni_flt_fsids /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.slft_PP_avg33_mni_flt_fsprior /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.slft_PP_avg33_mni_flt_fsids <br>--seg /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/aparc+aseg.nii.gz --nb 200 --ns 5000 --nu 0 --nk 5<br>&gt; <br>&gt; <br>&gt; <br>&gt; <br>&gt; cwd /Applications/freesurfer/subjects/subject_prova<br>&gt; cmdline /Applications/freesurfer/bin/dmri_paths<br>&gt; --outdir /Applications/freesurfer/subjects/subject_prova/Con05/dpath/5cpts/priormni/seg14/initmni/regflt/lh.cst_AS_avg33_mni_flt /Applications/freesurfer/subjects/subject_prova/Con05/dpath/5cpts/priormni/seg14/initmni/regflt/rh.cst_AS_avg33_mni_flt /Applications/freesurfer/subjects/subject_prova/Con05/dpath/5cpts/priormni/seg14/initmni/regflt/lh.ilf_AS_avg33_mni_flt /Applications/freesurfer/subjects/subject_prova/Con05/dpath/5cpts/priormni/seg14/initmni/regflt/rh.ilf_AS_avg33_mni_flt /Applications/freesurfer/subjects/subject_prova/Con05/dpath/5cpts/priormni/seg14/initmni/regflt/lh.unc_AS_avg33_mni_flt /Applications/freesurfer/subjects/subject_prova/Con05/dpath/5cpts/priormni/seg14/initmni/regflt/rh.unc_AS_avg33_mni_flt /Applications/freesurfer/subjects/subject_prova/Con05/dpath/5cpts/priormni/seg14/initmni/regflt/fmajor_PP_avg33_mni_flt /Applications/freesurfer/subjects/subject_prova/Con05/dpath/5cpts/priormni/seg14/initmni/regflt/fminor_PP_avg33_mni_flt /Applications/freesurfer/su<br>bjects/subject_prova/Con05/dpath/5cpts/priormni/seg14/initmni/regflt/lh.atr_PP_avg33_mni_flt /Applications/freesurfer/subjects/subject_prova/Con05/dpath/5cpts/priormni/seg14/initmni/regflt/rh.atr_PP_avg33_mni_flt /Applications/freesurfer/subjects/subject_prova/Con05/dpath/5cpts/priormni/seg14/initmni/regflt/lh.cab_PP_avg33_mni_flt /Applications/freesurfer/subjects/subject_prova/Con05/dpath/5cpts/priormni/seg14/initmni/regflt/rh.cab_PP_avg33_mni_flt /Applications/freesurfer/subjects/subject_prova/Con05/dpath/5cpts/priormni/seg14/initmni/regflt/lh.ccg_PP_avg33_mni_flt /Applications/freesurfer/subjects/subject_prova/Con05/dpath/5cpts/priormni/seg14/initmni/regflt/rh.ccg_PP_avg33_mni_flt /Applications/freesurfer/subjects/subject_prova/Con05/dpath/5cpts/priormni/seg14/initmni/regflt/lh.slfp_PP_avg33_mni_flt /Applications/freesurfer/subjects/subject_prova/Con05/dpath/5cpts/priormni/seg14/initmni/regflt/rh.slfp_PP_avg33_mni_flt /Applications/freesurfer/subjects/subject_prova/Con05/dpath/5cp<br>ts/priormni/seg14/initmni/regflt/lh.slft_PP!<br> _avg33_m<br>ni_flt /Applications/freesurfer/subjects/subject_prova/Con05/dpath/5cpts/priormni/seg14/initmni/regflt/rh.slft_PP_avg33_mni_flt --dwi /Applications/freesurfer/subjects/subject_prova/Con05/dmri/dwi.nii.gz --grad /Applications/freesurfer/subjects/subject_prova/Con05/dmri/bvecs --bval /Applications/freesurfer/subjects/subject_prova/Con05/dmri/bvals --mask /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/diff/aparc+aseg_mask.bbr.nii.gz --bpdir /Applications/freesurfer/subjects/subject_prova/Con05/dmri.bedpostX --ntr 2 --fmin 0.05 --roi1 /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.cst_AS_avg33_mni_flt_end1_dil.nii.gz /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.cst_AS_avg33_mni_flt_end1_dil.nii.gz /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.ilf_AS_avg33_mni_flt_end1_dil.nii.gz /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.ilf_AS_avg33_mni_flt_end1_dil.nii.gz /Applications/freesurfer/su<br>bjects/subject_prova/Con05/dlabel/mni/lh.unc_AS_avg33_mni_flt_end1_dil.nii.gz /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.unc_AS_avg33_mni_flt_end1_dil.nii.gz /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/fmajor_PP_avg33_mni_flt_end1_dil.nii.gz /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/fminor_PP_avg33_mni_flt_end1_dil.nii.gz /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.atr_PP_avg33_mni_flt_end1_dil.nii.gz /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.atr_PP_avg33_mni_flt_end1_dil.nii.gz /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.cab_PP_avg33_mni_flt_end1_dil.nii.gz /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.cab_PP_avg33_mni_flt_end1_dil.nii.gz /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.ccg_PP_avg33_mni_flt_end1_dil.nii.gz /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.ccg_PP_avg33<br>_mni_flt_end1_dil.nii.gz /Applications/free!<br> surfer/s<br>ubjects/subject_prova/Con05/dlabel/mni/lh.slfp_PP_avg33_mni_flt_end1_dil.nii.gz /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.slfp_PP_avg33_mni_flt_end1_dil.nii.gz /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.slft_PP_avg33_mni_flt_end1_dil.nii.gz /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.slft_PP_avg33_mni_flt_end1_dil.nii.gz --roi2 /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.cst_AS_avg33_mni_flt_end2_dil.nii.gz /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.cst_AS_avg33_mni_flt_end2_dil.nii.gz /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.ilf_AS_avg33_mni_flt_end2_dil.nii.gz /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.ilf_AS_avg33_mni_flt_end2_dil.nii.gz /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.unc_AS_avg33_mni_flt_end2_dil.nii.gz /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.<br>unc_AS_avg33_mni_flt_end2_dil.nii.gz /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/fmajor_PP_avg33_mni_flt_end2_dil.nii.gz /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/fminor_PP_avg33_mni_flt_end2_dil.nii.gz /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.atr_PP_avg33_mni_flt_end2_dil.nii.gz /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.atr_PP_avg33_mni_flt_end2_dil.nii.gz /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.cab_PP_avg33_mni_flt_end2_dil.nii.gz /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.cab_PP_avg33_mni_flt_end2_dil.nii.gz /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.ccg_PP_avg33_mni_flt_end2_dil.nii.gz /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.ccg_PP_avg33_mni_flt_end2_dil.nii.gz /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.slfp_PP_avg33_mni_flt_end2_dil.nii.gz /Applications/f<br>reesurfer/subjects/subject_prova/Con05/dlab!<br> el/mni/r<br>h.slfp_PP_avg33_mni_flt_end2_dil.nii.gz /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.slft_PP_avg33_mni_flt_end2_dil.nii.gz /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.slft_PP_avg33_mni_flt_end2_dil.nii.gz --reg /Applications/freesurfer/subjects/subject_prova/Con05/dmri/xfms/diff2mni.flt.mat --init /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/diff/lh.cst_AS_avg33_mni_flt_cpts_5.txt /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/diff/rh.cst_AS_avg33_mni_flt_cpts_5.txt /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/diff/lh.ilf_AS_avg33_mni_flt_cpts_5.txt /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/diff/rh.ilf_AS_avg33_mni_flt_cpts_5.txt /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/diff/lh.unc_AS_avg33_mni_flt_cpts_5.txt /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/diff/rh.unc_AS_avg33_mni_flt_cpts_5.txt /Applications/freesurfer/subjects/subject_prov<br>a/Con05/dlabel/diff/fmajor_PP_avg33_mni_flt_cpts_5.txt /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/diff/fminor_PP_avg33_mni_flt_cpts_5.txt /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/diff/lh.atr_PP_avg33_mni_flt_cpts_5.txt /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/diff/rh.atr_PP_avg33_mni_flt_cpts_5.txt /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/diff/lh.cab_PP_avg33_mni_flt_cpts_5.txt /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/diff/rh.cab_PP_avg33_mni_flt_cpts_5.txt /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/diff/lh.ccg_PP_avg33_mni_flt_cpts_5.txt /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/diff/rh.ccg_PP_avg33_mni_flt_cpts_5.txt /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/diff/lh.slfp_PP_avg33_mni_flt_cpts_5.txt /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/diff/rh.slfp_PP_avg33_mni_flt_cpts_5.txt /Applications/freesurfer/subject<br>s/subject_prova/Con05/dlabel/diff/lh.slft_P!<br> P_avg33_<br>mni_flt_cpts_5.txt /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/diff/rh.slft_PP_avg33_mni_flt_cpts_5.txt --nprior /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.cst_AS_avg33_mni_flt_fsnnprior /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.cst_AS_avg33_mni_flt_fsnnids /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.cst_AS_avg33_mni_flt_fsnnprior /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.cst_AS_avg33_mni_flt_fsnnids /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.ilf_AS_avg33_mni_flt_fsnnprior /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.ilf_AS_avg33_mni_flt_fsnnids /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.ilf_AS_avg33_mni_flt_fsnnprior /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.ilf_AS_avg33_mni_flt_fsnnids /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.unc_AS_avg33_mni<br>_flt_fsnnprior /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.unc_AS_avg33_mni_flt_fsnnids /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.unc_AS_avg33_mni_flt_fsnnprior /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.unc_AS_avg33_mni_flt_fsnnids /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/fmajor_PP_avg33_mni_flt_fsnnprior /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/fmajor_PP_avg33_mni_flt_fsnnids /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/fminor_PP_avg33_mni_flt_fsnnprior /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/fminor_PP_avg33_mni_flt_fsnnids /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.atr_PP_avg33_mni_flt_fsnnprior /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.atr_PP_avg33_mni_flt_fsnnids /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.atr_PP_avg33_mni_flt_fsnnprior /Ap<br>plications/freesurfer/subjects/subject_prov!<br> a/Con05/<br>dlabel/mni/rh.atr_PP_avg33_mni_flt_fsnnids /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.cab_PP_avg33_mni_flt_fsnnprior /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.cab_PP_avg33_mni_flt_fsnnids /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.cab_PP_avg33_mni_flt_fsnnprior /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.cab_PP_avg33_mni_flt_fsnnids /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.ccg_PP_avg33_mni_flt_fsnnprior /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.ccg_PP_avg33_mni_flt_fsnnids /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.ccg_PP_avg33_mni_flt_fsnnprior /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.ccg_PP_avg33_mni_flt_fsnnids /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.slfp_PP_avg33_mni_flt_fsnnprior /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.slf<br>p_PP_avg33_mni_flt_fsnnids /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.slfp_PP_avg33_mni_flt_fsnnprior /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.slfp_PP_avg33_mni_flt_fsnnids /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.slft_PP_avg33_mni_flt_fsnnprior /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.slft_PP_avg33_mni_flt_fsnnids /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.slft_PP_avg33_mni_flt_fsnnprior /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.slft_PP_avg33_mni_flt_fsnnids --lprior /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.cst_AS_avg33_mni_flt_fsprior /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.cst_AS_avg33_mni_flt_fsids /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.cst_AS_avg33_mni_flt_fsprior /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.cst_AS_avg3<br>3_mni_flt_fsids /Applications/freesurfer/su!<br> bjects/s<br>ubject_prova/Con05/dlabel/mni/lh.ilf_AS_avg33_mni_flt_fsprior /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.ilf_AS_avg33_mni_flt_fsids /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.ilf_AS_avg33_mni_flt_fsprior /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.ilf_AS_avg33_mni_flt_fsids /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.unc_AS_avg33_mni_flt_fsprior /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.unc_AS_avg33_mni_flt_fsids /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.unc_AS_avg33_mni_flt_fsprior /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.unc_AS_avg33_mni_flt_fsids /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/fmajor_PP_avg33_mni_flt_fsprior /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/fmajor_PP_avg33_mni_flt_fsids /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/fminor_P<br>P_avg33_mni_flt_fsprior /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/fminor_PP_avg33_mni_flt_fsids /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.atr_PP_avg33_mni_flt_fsprior /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.atr_PP_avg33_mni_flt_fsids /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.atr_PP_avg33_mni_flt_fsprior /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.atr_PP_avg33_mni_flt_fsids /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.cab_PP_avg33_mni_flt_fsprior /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.cab_PP_avg33_mni_flt_fsids /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.cab_PP_avg33_mni_flt_fsprior /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.cab_PP_avg33_mni_flt_fsids /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.ccg_PP_avg33_mni_flt_fsprior /Applications/<br>freesurfer/subjects/subject_prova/Con05/dla!<br> bel/mni/<br>lh.ccg_PP_avg33_mni_flt_fsids /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.ccg_PP_avg33_mni_flt_fsprior /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.ccg_PP_avg33_mni_flt_fsids /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.slfp_PP_avg33_mni_flt_fsprior /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.slfp_PP_avg33_mni_flt_fsids /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.slfp_PP_avg33_mni_flt_fsprior /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.slfp_PP_avg33_mni_flt_fsids /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.slft_PP_avg33_mni_flt_fsprior /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.slft_PP_avg33_mni_flt_fsids /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.slft_PP_avg33_mni_flt_fsprior /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.slft_PP_avg33_mni_flt_fsids <br>--seg /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/aparc+aseg.nii.gz --nb 200 --ns 5000 --nu 0 --nk 5 <br>&gt; sysname&nbsp; Darwin<br>&gt; hostname iMac-di-Stefano.local<br>&gt; machine&nbsp; x86_64<br>&gt; user&nbsp;&nbsp;&nbsp;&nbsp; Stefano<br>&gt; Output<br>&gt; directory: /Applications/freesurfer/subjects/subject_prova/Con05/dpath/5cpts/priormni/seg14/initmni/regflt/lh.cst_AS_avg33_mni_flt /Applications/freesurfer/subjects/subject_prova/Con05/dpath/5cpts/priormni/seg14/initmni/regflt/rh.cst_AS_avg33_mni_flt /Applications/freesurfer/subjects/subject_prova/Con05/dpath/5cpts/priormni/seg14/initmni/regflt/lh.ilf_AS_avg33_mni_flt /Applications/freesurfer/subjects/subject_prova/Con05/dpath/5cpts/priormni/seg14/initmni/regflt/rh.ilf_AS_avg33_mni_flt /Applications/freesurfer/subjects/subject_prova/Con05/dpath/5cpts/priormni/seg14/initmni/regflt/lh.unc_AS_avg33_mni_flt /Applications/freesurfer/subjects/subject_prova/Con05/dpath/5cpts/priormni/seg14/initmni/regflt/rh.unc_AS_avg33_mni_flt /Applications/freesurfer/subjects/subject_prova/Con05/dpath/5cpts/priormni/seg14/initmni/regflt/fmajor_PP_avg33_mni_flt /Applications/freesurfer/subjects/subject_prova/Con05/dpath/5cpts/priormni/seg14/initmni/regflt/fminor_PP_avg33_mni_flt /Applications/freesurfer/<br>subjects/subject_prova/Con05/dpath/5cpts/priormni/seg14/initmni/regflt/lh.atr_PP_avg33_mni_flt /Applications/freesurfer/subjects/subject_prova/Con05/dpath/5cpts/priormni/seg14/initmni/regflt/rh.atr_PP_avg33_mni_flt /Applications/freesurfer/subjects/subject_prova/Con05/dpath/5cpts/priormni/seg14/initmni/regflt/lh.cab_PP_avg33_mni_flt /Applications/freesurfer/subjects/subject_prova/Con05/dpath/5cpts/priormni/seg14/initmni/regflt/rh.cab_PP_avg33_mni_flt /Applications/freesurfer/subjects/subject_prova/Con05/dpath/5cpts/priormni/seg14/initmni/regflt/lh.ccg_PP_avg33_mni_flt /Applications/freesurfer/subjects/subject_prova/Con05/dpath/5cpts/priormni/seg14/initmni/regflt/rh.ccg_PP_avg33_mni_flt /Applications/freesurfer/subjects/subject_prova/Con05/dpath/5cpts/priormni/seg14/initmni/regflt/lh.slfp_PP_avg33_mni_flt /Applications/freesurfer/subjects/subject_prova/Con05/dpath/5cpts/priormni/seg14/initmni/regflt/rh.slfp_PP_avg33_mni_flt /Applications/freesurfer/subjects/subject_prova/Con05/dpath/5<br>cpts/priormni/seg14/initmni/regflt/lh.slft_!<br> PP_avg33<br>_mni_flt /Applications/freesurfer/subjects/subject_prova/Con05/dpath/5cpts/priormni/seg14/initmni/regflt/rh.slft_PP_avg33_mni_flt<br>&gt; DWIs: /Applications/freesurfer/subjects/subject_prova/Con05/dmri/dwi.nii.gz<br>&gt; Gradients: /Applications/freesurfer/subjects/subject_prova/Con05/dmri/bvecs<br>&gt; B-values: /Applications/freesurfer/subjects/subject_prova/Con05/dmri/bvals<br>&gt; Mask: /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/diff/aparc+aseg_mask.bbr.nii.gz<br>&gt; BEDPOST<br>&gt; directory: /Applications/freesurfer/subjects/subject_prova/Con05/dmri.bedpostX<br>&gt; Max number of tracts per voxel: 2<br>&gt; Tract volume fraction threshold: 0.05<br>&gt; Initial control point<br>&gt; file: /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/diff/lh.cst_AS_avg33_mni_flt_cpts_5.txt /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/diff/rh.cst_AS_avg33_mni_flt_cpts_5.txt /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/diff/lh.ilf_AS_avg33_mni_flt_cpts_5.txt /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/diff/rh.ilf_AS_avg33_mni_flt_cpts_5.txt /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/diff/lh.unc_AS_avg33_mni_flt_cpts_5.txt /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/diff/rh.unc_AS_avg33_mni_flt_cpts_5.txt /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/diff/fmajor_PP_avg33_mni_flt_cpts_5.txt /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/diff/fminor_PP_avg33_mni_flt_cpts_5.txt /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/diff/lh.atr_PP_avg33_mni_flt_cpts_5.txt /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/diff/rh.atr_PP_avg33<br>_mni_flt_cpts_5.txt /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/diff/lh.cab_PP_avg33_mni_flt_cpts_5.txt /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/diff/rh.cab_PP_avg33_mni_flt_cpts_5.txt /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/diff/lh.ccg_PP_avg33_mni_flt_cpts_5.txt /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/diff/rh.ccg_PP_avg33_mni_flt_cpts_5.txt /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/diff/lh.slfp_PP_avg33_mni_flt_cpts_5.txt /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/diff/rh.slfp_PP_avg33_mni_flt_cpts_5.txt /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/diff/lh.slft_PP_avg33_mni_flt_cpts_5.txt /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/diff/rh.slft_PP_avg33_mni_flt_cpts_5.txt<br>&gt; End ROI<br>&gt; 1: /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.cst_AS_avg33_mni_flt_end1_dil.nii.gz /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.cst_AS_avg33_mni_flt_end1_dil.nii.gz /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.ilf_AS_avg33_mni_flt_end1_dil.nii.gz /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.ilf_AS_avg33_mni_flt_end1_dil.nii.gz /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.unc_AS_avg33_mni_flt_end1_dil.nii.gz /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.unc_AS_avg33_mni_flt_end1_dil.nii.gz /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/fmajor_PP_avg33_mni_flt_end1_dil.nii.gz /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/fminor_PP_avg33_mni_flt_end1_dil.nii.gz /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.atr_PP_avg33_mni_flt_end1_dil.nii.gz /Applications/freesurfer/subjects/subject_prova/<br>Con05/dlabel/mni/rh.atr_PP_avg33_mni_flt_end1_dil.nii.gz /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.cab_PP_avg33_mni_flt_end1_dil.nii.gz /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.cab_PP_avg33_mni_flt_end1_dil.nii.gz /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.ccg_PP_avg33_mni_flt_end1_dil.nii.gz /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.ccg_PP_avg33_mni_flt_end1_dil.nii.gz /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.slfp_PP_avg33_mni_flt_end1_dil.nii.gz /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.slfp_PP_avg33_mni_flt_end1_dil.nii.gz /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.slft_PP_avg33_mni_flt_end1_dil.nii.gz /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.slft_PP_avg33_mni_flt_end1_dil.nii.gz<br>&gt; End ROI<br>&gt; 2: /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.cst_AS_avg33_mni_flt_end2_dil.nii.gz /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.cst_AS_avg33_mni_flt_end2_dil.nii.gz /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.ilf_AS_avg33_mni_flt_end2_dil.nii.gz /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.ilf_AS_avg33_mni_flt_end2_dil.nii.gz /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.unc_AS_avg33_mni_flt_end2_dil.nii.gz /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.unc_AS_avg33_mni_flt_end2_dil.nii.gz /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/fmajor_PP_avg33_mni_flt_end2_dil.nii.gz /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/fminor_PP_avg33_mni_flt_end2_dil.nii.gz /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.atr_PP_avg33_mni_flt_end2_dil.nii.gz /Applications/freesurfer/subjects/subject_prova/<br>Con05/dlabel/mni/rh.atr_PP_avg33_mni_flt_end2_dil.nii.gz /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.cab_PP_avg33_mni_flt_end2_dil.nii.gz /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.cab_PP_avg33_mni_flt_end2_dil.nii.gz /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.ccg_PP_avg33_mni_flt_end2_dil.nii.gz /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.ccg_PP_avg33_mni_flt_end2_dil.nii.gz /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.slfp_PP_avg33_mni_flt_end2_dil.nii.gz /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.slfp_PP_avg33_mni_flt_end2_dil.nii.gz /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.slft_PP_avg33_mni_flt_end2_dil.nii.gz /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.slft_PP_avg33_mni_flt_end2_dil.nii.gz<br>&gt; Neighbor aseg<br>&gt; prior: /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.cst_AS_avg33_mni_flt_fsnnprior /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.cst_AS_avg33_mni_flt_fsnnprior /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.ilf_AS_avg33_mni_flt_fsnnprior /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.ilf_AS_avg33_mni_flt_fsnnprior /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.unc_AS_avg33_mni_flt_fsnnprior /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.unc_AS_avg33_mni_flt_fsnnprior /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/fmajor_PP_avg33_mni_flt_fsnnprior /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/fminor_PP_avg33_mni_flt_fsnnprior /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.atr_PP_avg33_mni_flt_fsnnprior /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.atr_PP_avg33_mni_flt_fsnnprior<br> /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.cab_PP_avg33_mni_flt_fsnnprior /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.cab_PP_avg33_mni_flt_fsnnprior /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.ccg_PP_avg33_mni_flt_fsnnprior /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.ccg_PP_avg33_mni_flt_fsnnprior /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.slfp_PP_avg33_mni_flt_fsnnprior /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.slfp_PP_avg33_mni_flt_fsnnprior /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.slft_PP_avg33_mni_flt_fsnnprior /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.slft_PP_avg33_mni_flt_fsnnprior<br>&gt; Neighbor aseg label ID<br>&gt; list: /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.cst_AS_avg33_mni_flt_fsnnids /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.cst_AS_avg33_mni_flt_fsnnids /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.ilf_AS_avg33_mni_flt_fsnnids /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.ilf_AS_avg33_mni_flt_fsnnids /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.unc_AS_avg33_mni_flt_fsnnids /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.unc_AS_avg33_mni_flt_fsnnids /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/fmajor_PP_avg33_mni_flt_fsnnids /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/fminor_PP_avg33_mni_flt_fsnnids /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.atr_PP_avg33_mni_flt_fsnnids /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.atr_PP_avg33_mni_flt_fsnnids /Applications/freesu<br>rfer/subjects/subject_prova/Con05/dlabel/mni/lh.cab_PP_avg33_mni_flt_fsnnids /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.cab_PP_avg33_mni_flt_fsnnids /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.ccg_PP_avg33_mni_flt_fsnnids /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.ccg_PP_avg33_mni_flt_fsnnids /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.slfp_PP_avg33_mni_flt_fsnnids /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.slfp_PP_avg33_mni_flt_fsnnids /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.slft_PP_avg33_mni_flt_fsnnids /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.slft_PP_avg33_mni_flt_fsnnids<br>&gt; Local aseg<br>&gt; prior: /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.cst_AS_avg33_mni_flt_fsprior /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.cst_AS_avg33_mni_flt_fsprior /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.ilf_AS_avg33_mni_flt_fsprior /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.ilf_AS_avg33_mni_flt_fsprior /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.unc_AS_avg33_mni_flt_fsprior /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.unc_AS_avg33_mni_flt_fsprior /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/fmajor_PP_avg33_mni_flt_fsprior /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/fminor_PP_avg33_mni_flt_fsprior /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.atr_PP_avg33_mni_flt_fsprior /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.atr_PP_avg33_mni_flt_fsprior /Applications/frees<br>urfer/subjects/subject_prova/Con05/dlabel/mni/lh.cab_PP_avg33_mni_flt_fsprior /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.cab_PP_avg33_mni_flt_fsprior /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.ccg_PP_avg33_mni_flt_fsprior /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.ccg_PP_avg33_mni_flt_fsprior /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.slfp_PP_avg33_mni_flt_fsprior /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.slfp_PP_avg33_mni_flt_fsprior /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.slft_PP_avg33_mni_flt_fsprior /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.slft_PP_avg33_mni_flt_fsprior<br>&gt; Local aseg label ID<br>&gt; list: /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.cst_AS_avg33_mni_flt_fsids /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.cst_AS_avg33_mni_flt_fsids /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.ilf_AS_avg33_mni_flt_fsids /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.ilf_AS_avg33_mni_flt_fsids /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.unc_AS_avg33_mni_flt_fsids /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.unc_AS_avg33_mni_flt_fsids /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/fmajor_PP_avg33_mni_flt_fsids /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/fminor_PP_avg33_mni_flt_fsids /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.atr_PP_avg33_mni_flt_fsids /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.atr_PP_avg33_mni_flt_fsids /Applications/freesurfer/subjects/subjec<br>t_prova/Con05/dlabel/mni/lh.cab_PP_avg33_mni_flt_fsids /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.cab_PP_avg33_mni_flt_fsids /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.ccg_PP_avg33_mni_flt_fsids /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.ccg_PP_avg33_mni_flt_fsids /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.slfp_PP_avg33_mni_flt_fsids /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.slfp_PP_avg33_mni_flt_fsids /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/lh.slft_PP_avg33_mni_flt_fsids /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/rh.slft_PP_avg33_mni_flt_fsids<br>&gt; Segmentation<br>&gt; map: /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/aparc+aseg.nii.gz<br>&gt; Type of aseg prior: 0<br>&gt; DWI-to-atlas affine<br>&gt; registration: /Applications/freesurfer/subjects/subject_prova/Con05/dmri/xfms/diff2mni.flt.mat<br>&gt; Number of burn-in samples: 200<br>&gt; Number of post-burn-in samples: 5000<br>&gt; Keep every: 5-th sample<br>&gt; Update proposal every: 0-th sample<br>&gt; Loading spline control points<br>&gt; from /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/diff/lh.cst_AS_avg33_mni_flt_cpts_5.txt<br>&gt; Loading spline mask<br>&gt; from /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/diff/aparc+aseg_mask.bbr.nii.gz<br>&gt; Creating output<br>&gt; directory /Applications/freesurfer/subjects/subject_prova/Con05/dpath/5cpts/priormni/seg14/initmni/regflt/lh.cst_AS_avg33_mni_flt<br>&gt; Loading DWIs<br>&gt; from /Applications/freesurfer/subjects/subject_prova/Con05/dmri/dwi.nii.gz<br>&gt; Loading mask<br>&gt; from /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/diff/aparc+aseg_mask.bbr.nii.gz<br>&gt; Loading BEDPOST parameter samples<br>&gt; from /Applications/freesurfer/subjects/subject_prova/Con05/dmri.bedpostX<br>&gt; niiRead(): error opening<br>&gt; file /Applications/freesurfer/subjects/subject_prova/Con05/dmri.bedpostX/merged_ph1samples.nii.gz<br>&gt; ERROR: Could not<br>&gt; read /Applications/freesurfer/subjects/subject_prova/Con05/dmri.bedpostX/merged_ph1samples.nii.gz<br>&gt; Darwin iMac-di-Stefano.local 12.2.1 Darwin Kernel Version 12.2.1: Thu<br>&gt; Oct 18 12:13:47 PDT 2012; root:xnu-2050.20.9~1/RELEASE_X86_64 x86_64<br>&gt; <br>&gt; <br>&gt; trac-paths exited with ERRORS at Wed Feb 13 08:20:52 CET 2013<br>&gt; <br>&gt; <br>&gt; [iMac-di-Stefano:freesurfer/subjects/subject_prova] Stefano% <br>&gt; <br>&gt; Thanks, <br>&gt; <br>&gt; <br>&gt; Stefano<br>&gt; <br>&gt; <br>&gt; <br>&gt; <br>&gt; ----Messaggio originale----<br>&gt; Da: ayendiki@nmr.mgh.harvard.edu<br>&gt; Data: 13-feb-2013 0.43<br>&gt; A: &lt;stdp82@virgilio.it&gt;<br>&gt; Ogg: Re: R: Re: R: [Freesurfer] R: Re:&nbsp; R:&nbsp; trac-all -path error<br>&gt; <br>&gt; <br>&gt; Bedpostx hasn't finished running. You have to wait for it to finish.<br>&gt; <br>&gt; On Wed, 13 Feb 2013, stdp82@virgilio.it wrote:<br>&gt; <br>&gt; &gt; Yes, I clearly understand it.<br>&gt; &gt; I have this error after -path step <br>&gt; &gt; &gt; &gt; Loading mask from<br>&gt; &gt; &gt;<br>&gt; &gt; /Applications/freesurfer/subjects/subject_prova/Con02/dlabel/diff/aparc+aseg_mask.bbr.nii.gz<br>&gt; &gt; &gt; &gt; Loading BEDPOST parameter samples from<br>&gt; &gt; /Applications/freesurfer/subjects/subject_prova/Con02/dmri.bedpostX<br>&gt; &gt; &gt; &gt; niiRead(): error opening file<br>&gt; &gt; &gt;<br>&gt; &gt; /Applications/freesurfer/subjects/subject_prova/Con02/dmri.bedpostX/merged_ph1samples.nii.gz<br>&gt; &gt; &gt; &gt; ERROR: Could not read<br>&gt; &gt; &gt;<br>&gt; &gt; /Applications/freesurfer/subjects/subject_prova/Con02/dmri.bedpostX/merged_ph1samples.nii.gz<br>&gt; &gt; after prep and bedpostx I have these folder<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/mri/<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri.bedpostX/<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/scripts/<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dpath/<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dlabel/<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/stats/<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/label/<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/rh.EC_average/<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/lh.EC_average/<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/fsaverage/<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/touch/<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/surf/<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/bem/<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/src/<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/tmp/<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/trash/<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/bvecs.txt<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/bvals.txt<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/data.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/MPRAGE.nii.gz<br>&gt; &gt; <br>&gt; &gt; <br>&gt; &gt; particularly in dmri.bedpostx I have:<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/brain_anat_mni.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/brain_anat_orig.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/brain_anat.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/bvals<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/bvecs<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0000.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0001.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0002.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0003.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0004.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0005.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0006.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0007.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0008.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0009.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0010.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0011.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0012.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0013.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0014.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0015.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0016.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0017.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0018.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0019.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0020.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0021.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0022.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0023.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0024.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0025.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0026.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0027.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0028.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0029.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0030.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0031.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0032.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0033.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0034.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0035.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0036.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0037.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0038.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0039.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0040.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0041.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0042.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0043.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0044.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0045.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0046.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0047.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0048.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0049.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0050.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0051.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0052.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0053.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0054.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0055.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0056.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0057.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0058.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0059.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0060.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0061.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0062.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0063.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0064.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0065.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0066.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0067.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0068.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0069.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0070.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0071.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0072.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0073.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0074.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0075.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0076.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0077.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0078.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0079.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0080.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0081.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0082.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0083.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0084.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0085.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0086.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0087.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0088.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0089.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0090.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0091.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0092.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0093.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0094.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0095.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0096.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0097.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0098.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0099.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0100.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0101.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0102.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0103.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0104.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0105.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0106.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0107.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0108.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0109.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0110.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0111.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0112.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0113.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0114.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0115.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0116.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0117.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0118.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0119.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0120.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0121.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0122.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0123.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0124.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0125.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0126.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0127.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0128.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0129.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0130.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0131.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0132.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0133.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0134.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0135.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0136.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0137.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0138.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0139.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0140.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0141.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0142.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0143.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0144.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0145.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0146.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0147.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0148.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0149.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0150.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0151.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0152.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0153.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0154.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0155.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0156.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0157.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0158.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0159.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0160.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0161.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0162.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0163.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0164.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0165.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0166.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0167.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0168.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0169.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0170.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0171.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0172.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0173.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0174.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0175.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0176.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0177.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0178.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0179.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0180.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data_slice_0181.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/data.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/dtifit_FA.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/dtifit_L1.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/dtifit_L2.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/dtifit_L3.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/dtifit_MD.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/dtifit_MO.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/dtifit_S0.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/dtifit_V1.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/dtifit_V2.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/dtifit_V3.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/dwi_orig_flip.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/dwi_orig.mghdti.bvals<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/dwi_orig.mghdti.bvecs<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/dwi_orig.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/dwi_snr.txt<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/dwi.ecclog<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/dwi.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/lowb_brain_anat.flt.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/lowb_brain_mni.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/lowb_brain.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/lowb.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/mni/<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/nodif_brain_mask_slice_0000.nii<br>&gt; &gt; .gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/nodif_brain_mask_slice_0001.nii<br>&gt; &gt; .gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/nodif_brain_mask_slice_0002.nii<br>&gt; &gt; .gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/nodif_brain_mask_slice_0003.nii<br>&gt; &gt; .gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/nodif_brain_mask_slice_0004.nii<br>&gt; &gt; .gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/nodif_brain_mask_slice_0005.nii<br>&gt; &gt; .gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/nodif_brain_mask_slice_0006.nii<br>&gt; &gt; .gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/nodif_brain_mask_slice_0007.nii<br>&gt; &gt; .gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/nodif_brain_mask_slice_0008.nii<br>&gt; &gt; .gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/nodif_brain_mask_slice_0009.nii<br>&gt; &gt; .gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/nodif_brain_mask_slice_0010.nii<br>&gt; &gt; .gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/nodif_brain_mask_slice_0011.nii<br>&gt; &gt; .gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/nodif_brain_mask_slice_0012.nii<br>&gt; &gt; .gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/nodif_brain_mask_slice_0013.nii<br>&gt; &gt; .gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/nodif_brain_mask_slice_0014.nii<br>&gt; &gt; .gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/nodif_brain_mask_slice_0015.nii<br>&gt; &gt; .gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/nodif_brain_mask_slice_0016.nii<br>&gt; &gt; .gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/nodif_brain_mask_slice_0017.nii<br>&gt; &gt; .gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/nodif_brain_mask_slice_0018.nii<br>&gt; &gt; .gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/nodif_brain_mask_slice_0019.nii<br>&gt; &gt; .gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/nodif_brain_mask_slice_0020.nii<br>&gt; &gt; .gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/nodif_brain_mask_slice_0021.nii<br>&gt; &gt; .gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/nodif_brain_mask_slice_0022.nii<br>&gt; &gt; .gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/nodif_brain_mask_slice_0023.nii<br>&gt; &gt; .gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/nodif_brain_mask_slice_0024.nii<br>&gt; &gt; .gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/nodif_brain_mask_slice_0025.nii<br>&gt; &gt; .gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/nodif_brain_mask_slice_0026.nii<br>&gt; &gt; .gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/nodif_brain_mask_slice_0027.nii<br>&gt; &gt; .gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/nodif_brain_mask_slice_0028.nii<br>&gt; &gt; .gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/nodif_brain_mask_slice_0029.nii<br>&gt; &gt; .gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/nodif_brain_mask_slice_0030.nii<br>&gt; &gt; .gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/nodif_brain_mask_slice_0031.nii<br>&gt; &gt; .gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/nodif_brain_mask_slice_0032.nii<br>&gt; &gt; .gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/nodif_brain_mask_slice_0033.nii<br>&gt; &gt; .gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/nodif_brain_mask_slice_0034.nii<br>&gt; &gt; .gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/nodif_brain_mask_slice_0035.nii<br>&gt; &gt; .gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/nodif_brain_mask_slice_0036.nii<br>&gt; &gt; .gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/nodif_brain_mask_slice_0037.nii<br>&gt; &gt; .gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/nodif_brain_mask_slice_0038.nii<br>&gt; &gt; .gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/nodif_brain_mask_slice_0039.nii<br>&gt; &gt; .gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/nodif_brain_mask_slice_0040.nii<br>&gt; &gt; .gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/nodif_brain_mask_slice_0041.nii<br>&gt; &gt; .gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/nodif_brain_mask_slice_0042.nii<br>&gt; &gt; .gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/nodif_brain_mask_slice_0043.nii<br>&gt; &gt; .gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/nodif_brain_mask_slice_0044.nii<br>&gt; &gt; .gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/nodif_brain_mask_slice_0045.nii<br>&gt; 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&gt; .gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/nodif_brain_mask_slice_0151.nii<br>&gt; &gt; .gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/nodif_brain_mask_slice_0152.nii<br>&gt; &gt; .gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/nodif_brain_mask_slice_0153.nii<br>&gt; &gt; .gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/nodif_brain_mask_slice_0154.nii<br>&gt; &gt; .gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/nodif_brain_mask_slice_0155.nii<br>&gt; &gt; .gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/nodif_brain_mask_slice_0156.nii<br>&gt; &gt; .gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/nodif_brain_mask_slice_0157.nii<br>&gt; &gt; .gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/nodif_brain_mask_slice_0158.nii<br>&gt; &gt; .gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/nodif_brain_mask_slice_0159.nii<br>&gt; &gt; .gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/nodif_brain_mask_slice_0160.nii<br>&gt; &gt; .gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/nodif_brain_mask_slice_0161.nii<br>&gt; &gt; .gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/nodif_brain_mask_slice_0162.nii<br>&gt; &gt; .gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/nodif_brain_mask_slice_0163.nii<br>&gt; &gt; .gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/nodif_brain_mask_slice_0164.nii<br>&gt; &gt; .gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/nodif_brain_mask_slice_0165.nii<br>&gt; &gt; .gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/nodif_brain_mask_slice_0166.nii<br>&gt; &gt; .gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/nodif_brain_mask_slice_0167.nii<br>&gt; &gt; .gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/nodif_brain_mask_slice_0168.nii<br>&gt; &gt; .gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/nodif_brain_mask_slice_0169.nii<br>&gt; &gt; .gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/nodif_brain_mask_slice_0170.nii<br>&gt; &gt; .gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/nodif_brain_mask_slice_0171.nii<br>&gt; &gt; .gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/nodif_brain_mask_slice_0172.nii<br>&gt; &gt; .gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/nodif_brain_mask_slice_0173.nii<br>&gt; &gt; .gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/nodif_brain_mask_slice_0174.nii<br>&gt; &gt; .gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/nodif_brain_mask_slice_0175.nii<br>&gt; &gt; .gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/nodif_brain_mask_slice_0176.nii<br>&gt; &gt; .gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/nodif_brain_mask_slice_0177.nii<br>&gt; &gt; .gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/nodif_brain_mask_slice_0178.nii<br>&gt; &gt; .gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/nodif_brain_mask_slice_0179.nii<br>&gt; &gt; .gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/nodif_brain_mask_slice_0180.nii<br>&gt; &gt; .gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/nodif_brain_mask_slice_0181.nii<br>&gt; &gt; .gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/nodif_brain_mask.nii.gz<br>&gt; &gt;<br>&gt; file://localhost/Applications/freesurfer/subjects/subject_prova/Diff01/dmri/xfms/<br>&gt; &gt; <br>&gt; Segmentation<br>&gt; map: /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/mni/aparc+aseg.nii.gz<br>&gt; Type of aseg prior: 0<br>&gt; DWI-to-atlas affine<br>&gt; registration: /Applications/freesurfer/subjects/subject_prova/Con05/dmri/xfms/diff2mni.flt.mat<br>&gt; Number of burn-in samples: 200<br>&gt; Number of post-burn-in samples: 5000<br>&gt; Keep every: 5-th sample<br>&gt; Update proposal every: 0-th sample<br>&gt; Loading spline control points<br>&gt; from /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/diff/lh.cst_AS_avg33_mni_flt_cpts_5.txt<br>&gt; Loading spline mask<br>&gt; from /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/diff/aparc+aseg_mask.bbr.nii.gz<br>&gt; Creating output<br>&gt; directory /Applications/freesurfer/subjects/subject_prova/Con05/dpath/5cpts/priormni/seg14/initmni/regflt/lh.cst_AS_avg33_mni_flt<br>&gt; Loading DWIs<br>&gt; from /Applications/freesurfer/subjects/subject_prova/Con05/dmri/dwi.nii.gz<br>&gt; Loading mask<br>&gt; from /Applications/freesurfer/subjects/subject_prova/Con05/dlabel/diff/aparc+aseg_mask.bbr.nii.gz<br>&gt; Loading BEDPOST parameter samples<br>&gt; from /Applications/freesurfer/subjects/subject_prova/Con05/dmri.bedpostX<br>&gt; niiRead(): error opening<br>&gt; file /Applications/freesurfer/subjects/subject_prova/Con05/dmri.bedpostX/merged_ph1samples.nii.gz<br>&gt; ERROR: Could not<br>&gt; read /Applications/freesurfer/subjects/subject_prova/Con05/dmri.bedpostX/merged_ph1samples.nii.gz<br>&gt; Darwin iMac-di-Stefano.local 12.2.1 Darwin Kernel Version 12.2.1: Thu<br>&gt; Oct 18 12:13:47 PDT 2012; root:xnu-2050.20.9~1/RELEASE_X86_64 x86_64<br>&gt; <br>&gt; <br>&gt; trac-paths exited with ERRORS at Wed Feb 13 08:20:52 CET 2013<br>&gt; &gt; Thanks,<br>&gt; &gt; <br>&gt; &gt; <br>&gt; &gt; Stefano<br>&gt; &gt; <br>&gt; &gt; <br>&gt; &gt; <br>&gt; &gt; ----Messaggio originale----<br>&gt; &gt; Da: ayendiki@nmr.mgh.harvard.edu<br>&gt; &gt; Data: 13-feb-2013 0.06<br>&gt; &gt; A: &lt;stdp82@virgilio.it&gt;<br>&gt; &gt; Cc: &lt;freesurfer@nmr.mgh.harvard.edu&gt;<br>&gt; &gt; Ogg: Re: R: [Freesurfer] R: Re:&nbsp; R:&nbsp; trac-all -path error<br>&gt; &gt; <br>&gt; &gt; <br>&gt; &gt; Hi Stefano - The order of the 3 trac-all steps is not<br>&gt; inter-changeable.<br>&gt; &gt; You need to run bedpostx *before* you can run the path<br>&gt; reconstruction.<br>&gt; &gt; <br>&gt; &gt; a.y<br>&gt; &gt; <br>&gt; &gt; On Wed, 13 Feb 2013, stdp82@virgilio.it wrote:<br>&gt; &gt; <br>&gt; &gt; &gt; Thank you Anastasia. But I do not understand why I have the error<br>&gt; in trac-all -path. The configuration<br>&gt; &gt; file<br>&gt; &gt; &gt; that I have attached is good?<br>&gt; &gt; &gt; Stefano<br>&gt; &gt; &gt;<br>&gt; &gt; &gt; ----Messaggio originale----<br>&gt; &gt; &gt; Da: stdp82@virgilio.it<br>&gt; &gt; &gt; Data: 12-feb-2013 23.27<br>&gt; &gt; &gt; A: &lt;ayendiki@nmr.mgh.harvard.edu&gt;<br>&gt; &gt; &gt; Cc: &lt;freesurfer@nmr.mgh.harvard.edu&gt;<br>&gt; &gt; &gt; Ogg: [Freesurfer] R: Re: R: trac-all -path error<br>&gt; &gt; &gt;<br>&gt; &gt; &gt; Hi Anastasia,<br>&gt; &gt; &gt; thanks! I hope that is all ok in Boston. <br>&gt; &gt; &gt;<br>&gt; &gt; &gt; I'm attaching the configuration file that I'm using.<br>&gt; &gt; &gt;<br>&gt; &gt; &gt; I'd like ask you if/how I can also run the second step of trac-all<br>&gt; (bedpostx) using FSL on other pc? May I<br>&gt; &gt; &gt; directly run in FSL dmri folder? Do you think that I should rename<br>&gt; some files?<br>&gt; &gt; &gt;<br>&gt; &gt; &gt; An additional question. For some subjects (no for subject that I'm<br>&gt; running with the config file that I<br>&gt; &gt; have<br>&gt; &gt; &gt; attached) I have 16 direction and b=0 is the last of these. Is the<br>&gt; nb0=16?<br>&gt; &gt; &gt;<br>&gt; &gt; &gt; Thank you very much.<br>&gt; &gt; &gt;<br>&gt; &gt; &gt;<br>&gt; &gt; &gt; Stefano<br>&gt; &gt; &gt;<br>&gt; &gt; &gt;<br>&gt; &gt; &gt;<br>&gt; &gt; &gt; ----Messaggio originale----<br>&gt; &gt; &gt; Da: ayendiki@nmr.mgh.harvard.edu<br>&gt; &gt; &gt; Data: 12-feb-2013 17.45<br>&gt; &gt; &gt; A: &lt;stdp82@virgilio.it&gt;<br>&gt; &gt; &gt; Cc: &lt;freesurfer@nmr.mgh.harvard.edu&gt;<br>&gt; &gt; &gt; Ogg: Re: [Freesurfer] R:&nbsp; trac-all -path error<br>&gt; &gt; &gt;<br>&gt; &gt; &gt;<br>&gt; &gt; &gt; Hi Stefano - There is no need to attach the trac-all script, I am<br>&gt; quite<br>&gt; &gt; &gt; familiar with it. Perhaps you could attach the configuration file<br>&gt; that you<br>&gt; &gt; &gt; set up?<br>&gt; &gt; &gt;<br>&gt; &gt; &gt; Thanks,<br>&gt; &gt; &gt; a.y<br>&gt; &gt; &gt;<br>&gt; &gt; &gt; On Mon, 11 Feb 2013, stdp82@virgilio.it wrote:<br>&gt; &gt; &gt;<br>&gt; &gt; &gt; &gt; I'm attaching my trac-all file for check.Thanks,<br>&gt; &gt; &gt; &gt;<br>&gt; &gt; &gt; &gt; Stefano<br>&gt; &gt; &gt; &gt;<br>&gt; &gt; &gt; &gt; ----Messaggio originale----<br>&gt; &gt; &gt; &gt; Da: stdp82@virgilio.it<br>&gt; &gt; &gt; &gt; Data: 11-feb-2013 14.42<br>&gt; &gt; &gt; &gt; A: &lt;freesurfer@nmr.mgh.harvard.edu&gt;<br>&gt; &gt; &gt; &gt; Cc: &lt;ayendiki@nmr.mgh.harvard.edu&gt;<br>&gt; &gt; &gt; &gt; Ogg: [Freesurfer] trac-all -path error<br>&gt; &gt; &gt; &gt;<br>&gt; &gt; &gt; &gt; Hi list,<br>&gt; &gt; &gt; &gt; I'm running trac-all -path -c $FREESURFER/dmrirc_single_subject<br>&gt; but I have this error:<br>&gt; &gt; &gt; &gt;<br>&gt; &gt; &gt; &gt; Loading mask from<br>&gt; &gt; &gt;<br>&gt; &gt; /Applications/freesurfer/subjects/subject_prova/Con02/dlabel/diff/aparc+aseg_mask.bbr.nii.gz<br>&gt; &gt; &gt; &gt; Loading BEDPOST parameter samples from<br>&gt; &gt; /Applications/freesurfer/subjects/subject_prova/Con02/dmri.bedpostX<br>&gt; &gt; &gt; &gt; niiRead(): error opening file<br>&gt; &gt; &gt;<br>&gt; &gt; /Applications/freesurfer/subjects/subject_prova/Con02/dmri.bedpostX/merged_ph1samples.nii.gz<br>&gt; &gt; &gt; &gt; ERROR: Could not read<br>&gt; &gt; &gt;<br>&gt; &gt; /Applications/freesurfer/subjects/subject_prova/Con02/dmri.bedpostX/merged_ph1samples.nii.gz<br>&gt; &gt; &gt; &gt;<br>&gt; &gt; &gt; &gt;<br>&gt; From http://www.mail-archive.com/freesurfer@nmr.mgh.harvard.edu/msg22066.html <br>&gt; &gt; &gt; &gt; I'm deducing that the error may be related trace-all upload.<br>&gt; &gt; &gt; &gt;<br>&gt; &gt; &gt; &gt; I have doing this upload but I visualize always the same error.<br>&gt; &gt; &gt; &gt;<br>&gt; &gt; &gt; &gt; I attached tract-all uploades file that live<br>&gt; in /Applications/freesurfer/bin.<br>&gt; &gt; &gt; &gt;<br>&gt; &gt; &gt; &gt; Please, could you check it?<br>&gt; &gt; &gt; &gt;<br>&gt; &gt; &gt; &gt; I have also other question. May I run the second step of<br>&gt; trac-all (bedpostx) using FSL on other pc? In<br>&gt; &gt; &gt; this<br>&gt; &gt; &gt; &gt; way, could I directly run in FSL dmri folder? Do you think that<br>&gt; I should rename some files?<br>&gt; &gt; &gt; &gt;<br>&gt; &gt; &gt; &gt; Thanks,<br>&gt; &gt; &gt; &gt;<br>&gt; &gt; &gt; &gt;<br>&gt; &gt; &gt; &gt; Stefano<br>&gt; &gt; &gt; &gt;<br>&gt; &gt; &gt; &gt;<br>&gt; &gt; &gt; &gt;<br>&gt; &gt; &gt; &gt;_______________________________________________<br>&gt; &gt; &gt; Freesurfer mailing list<br>&gt; &gt; &gt; Freesurfer@nmr.mgh.harvard.edu<br>&gt; &gt; &gt; https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer<br>&gt; &gt; &gt;<br>&gt; &gt; &gt;<br>&gt; &gt; &gt; The information in this e-mail is intended only for the person to<br>&gt; whom it is<br>&gt; &gt; &gt; addressed. If you believe this e-mail was sent to you in error and<br>&gt; the e-mail<br>&gt; &gt; &gt; contains patient information, please contact the Partners<br>&gt; Compliance HelpLine at<br>&gt; &gt; &gt; http://www.partners.org/complianceline . If the e-mail was sent to<br>&gt; you in error<br>&gt; &gt; &gt; but does not contain patient information, please contact the<br>&gt; sender and properly<br>&gt; &gt; &gt; dispose of the e-mail.<br>&gt; &gt; &gt;<br>&gt; &gt; &gt;<br>&gt; &gt; &gt;<br>&gt; &gt; &gt;<br>&gt; &gt; &gt;<br>&gt; &gt; &gt;<br>&gt; &gt; <br>&gt; &gt; <br>&gt; &gt;<br>&gt; <br>&gt; <br>&gt; _______________________________________________<br>&gt; Freesurfer mailing list<br>&gt; Freesurfer@nmr.mgh.harvard.edu<br>&gt; https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer<br><br>-- <br>-------------------------------------------------------------------------------------<br>Juan Eugenio Iglesias, PhD<br>http://www.jeiglesias.com<br>iglesias@nmr.mgh.harvard.edu<br>Athinoula A. Martinos Center for Biomedical Imaging<br>Department of Radiology, MGH, Harvard Medical School<br>149 Thirteenth Street, Suite 2301<br>Charlestown, Massachusetts 2129<br>U.S.A.<br><br><br><br>_______________________________________________<br>Freesurfer mailing list<br>Freesurfer@nmr.mgh.harvard.edu<br>https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer<br><br><br>
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