On 06/01/2012 11:55 AM,
mdkruepke@uwalumni.com wrote:
> Bruce-
>
> It is, and i agree, for instance here is the lh.cortex.label file
>
> #label , from subject ??
> 149955
> 22 -10.374 55.016 3.203 0.0000000000
> 112 -6.294 36.386 -7.809 0.0000000000
> 114 -6.137 38.556 13.808 0.0000000000
> 247 -11.304 45.214 -2.709 0.0000000000
> 248 -6.278 39.973 2.192 0.0000000000
> 249 -10.766 45.545 6.476 0.0000000000
> 507 -11.087 42.990 18.865 0.0000000000
>
> On 6/1/12, Bruce Fischl<
fischl@nmr.mgh.harvard.edu> wrote:
>> that is the rh.cortex.label file? It doesn't look like it....
>>
>> On Fri, 1 Jun 2012,
mdkruepke@uwalumni.com
>> wrote:
>>
>>> Bruce-
>>>
>>> Here you go. Subjects recoded.
>>>
>>> Graph: name
>>>
>>> Data: path
>>> Variable: Subject
>>> Measurement: external
>>> subject id, class id, variable value, measurement value, standard
>>> deviation
>>> ------------
>>> S1 Cl1 0.0 3.10522500831 0.268702566292
>>> S2 Cl1 1.0 2.67585065105 0.396833961125
>>> S3 Cl1 2.0 3.07631433273 0.173949345568
>>> S4 Cl1 3.0 2.85668014067 0.0907729539181
>>> S5 Cl1 4.0 3.24184323479 0.212597547853
>>> S6 Cl1 5.0 2.54176559894 0.111183384791
>>> S7 Cl1 6.0 2.87165045086 0.137271513295
>>> S8 Cl1 7.0 2.72165358457 0.128648203321
>>>
>>> On 6/1/12, Bruce Fischl<
fischl@nmr.mgh.harvard.edu> wrote:
>>>> something like this:
>>>>
>>>> head ~/local_subjects/bruce/label/rh.cortex.label
>>>> #!ascii label , from subject vox2ras=TkReg
>>>> 141813
>>>> 0 11.129 -93.761 -16.820 0.0000000000
>>>> 1 11.136 -93.912 -16.623 0.0000000000
>>>> 2 10.755 -93.913 -16.573 0.0000000000
>>>> 3 11.696 -93.374 -17.237 0.0000000000
>>>> 4 11.022 -93.203 -16.969 0.0000000000
>>>> 5 11.020 -93.855 -17.042 0.0000000000
>>>> 6 10.248 -93.745 -16.712 0.0000000000
>>>> 7 11.591 -93.603 -17.551 0.0000000000
>>>>
>>>>
>>>>
>>>> and please cc the list so others can answer!
>>>> On Fri, 1 Jun 2012,
>>>>
mdkruepke@uwalumni.com wrote:
>>>>
>>>>> Bruce-
>>>>> The partition does not appear to be full, although we have been having
>>>>> issues with migrating data so
>>>>> that could be a source of the issue. The rh.cortex.label does exist and
>>>>> is
>>>>> located within the subject's
>>>>> label dir. As for the first couple of lines, I am unsure what you are
>>>>> asking for.
>>>>>
>>>>> Thanks for the quick response!
>>>>>
>>>>> Best-
>>>>> Michael
>>>>>
>>>>> On Fri, Jun 1, 2012 at 10:26 AM, Bruce Fischl
>>>>> <
fischl@nmr.mgh.harvard.edu>
>>>>> wrote:
>>>>> Hi Michael
>>>>>
>>>>> can you check to see that your partition is not full? Does the
>>>>> rh.cortex.label file exist
>>>>> in that subject's label dir? If so, what are the first couple of
>>>>> lines?
>>>>>
>>>>> cheers
>>>>> Bruce
>>>>>
>>>>> On Fri, 1 Jun 2012,
mdkruepke@uwalumni.com wrote:
>>>>>
>>>>> To anyone who can help -
>>>>> I am trying to tun a GLM on a set of data and am currently
>>>>> receiving an error
>>>>> during the mri_surf2surf
>>>>> portion. When running this portion i receive an error (
>>>>> could
>>>>> not scan # of
>>>>> lines from (path to
>>>>> rh.cortex.label)). This does not happen when running this
>>>>> portion for the lh,
>>>>> only the right. I am
>>>>> unable to find any information on this error on the mailing
>>>>> list so im hoping
>>>>> someone can help!
>>>>>
>>>>> Best-
>>>>> Michael Kruepke
>>>>>
>>>>> --
>>>>> Michael D. Kruepke
>>>>> PhD - University of Illinois at Urbana-Champaign
>>>>> BA - Psych - University of Wisconsin-Madison
>>>>>
mdkruepke@gmail.com
>>>>>
(262)-483-7449
>>>>>
>>>>>
>>>>>
>>>>>
>>>>>
>>>>> The information in this e-mail is intended only for the person to whom
>>>>> it
>>>>> is
>>>>> addressed. If you believe this e-mail was sent to you in error and the
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>>>>> contains patient information, please contact the Partners Compliance
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>>>>>
>>>>>
>>>>>
>>>>> --
>>>>> Michael D. Kruepke
>>>>> PhD - University of Illinois at Urbana-Champaign
>>>>> BA - Psych - University of Wisconsin-Madison
>>>>>
mdkruepke@gmail.com
>>>>>
(262)-483-7449
>>>>>
>>>>>
>>>>>
>>>
>>>
>
--