Dear all,

I’m afraid this is a very basic Linux question, but I am not that familiar with it.

 

I downloaded and installed FSLVm7_64 on a Windows7 host.

Installation went well, and if I type fsl in the terminal window, a GUI (a menu list) pops up.

My first attempt was to click “BET”, select an input image and Run standard brain extraction using bet. Then I get the messages (see below):

“ error while loading shared libraries: libopenblas.so.0: cannot open shared object file: No such file or directory”

 

The libopenblas.so is in my /home/flsuser/Data directory.

I tried installing it sudo yum install libopenblas.so, but get the reply “No package libopenblas.so available.” (see below)

 

I have set the $FSLDIR variable :

[fsluser@localhost Data]$ echo $FSLDIR

/usr/local/fsl

 

What can I do?  

 

Very grateful for help!

 

Yours

Karin

 

------------

[fsluser@localhost ~]$ fsl

/usr/local/fsl/bin/bet /home/fsluser/Data/s20181112-0601-00006-000001-01 /home/fsluser/Data/s20181112-0601-00006-000001-01_brain  -f 0.5 -g 0

/usr/local/fsl/bin/bet2: error while loading shared libraries: libopenblas.so.0: cannot open shared object file: No such file or directory

Finished

 

/home/fsluser

[fsluser@localhost ~]$ cd Data/

 

[fsluser@localhost Data]$ ls

libopenblas.so  s20181112-0601-00006-000001-01.nii

 

[fsluser@localhost Data]$ sudo yum install libopenblas.so

[sudo] password for fsluser:

Loaded plugins: fastestmirror, langpacks

Loading mirror speeds from cached hostfile

* base: mirror.hh.se

* extras: mirror.hh.se

* updates: mirror.hh.se

No package libopenblas.so available.

Error: Nothing to do

 

[fsluser@localhost Data]$ flirt /v

flirt: error while loading shared libraries: libopenblas.so.0: cannot open shared object file: No such file or directory