Hi Stefano,

I’m wondering what are your images dimensions in both studies. Maybe running when the system is less busy, or rebooting the computer will help.

Best,

Yujing

From: freesurfer-bounces@nmr.mgh.harvard.edu <freesurfer-bounces@nmr.mgh.harvard.edu> On Behalf Of stdp82@virgilio.it
Sent: Sunday, February 12, 2023 3:11 PM
To: freesurfer@nmr.mgh.harvard.edu
Subject: [Freesurfer] ScLimbic: error: could not allocate memory for slice 1 out of 256error: mri_convert --conform failed!

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Hi list, the error is reported below.

Of note I have just runned, with success, ScLimbic for another study.

Thus, I do not understand which is the issue for this one.

Thanks

Stefano

mri_sclimbic_seg --i FOLDER --o FOLDER --write_volumes --write_qa_stats --etiv --conform

/Applications/freesurfer/7.3.2/sclimbic/python/scripts/mri_sclimbic_seg --i FOLDER --o FOLDER --write_volumes --write_qa_stats --etiv --conform

Excluding seg [853]Using CPUUsing 1 thread(s)Loaded lookup table /Applications/freesurfer/7.3.2/sclimbic/models/sclimbic.ctab

Loaded population stats /Applications/freesurfer/7.3.2/sclimbic/models/sclimbic.volstats.csv

Loaded model weights /Applications/freesurfer/7.3.2/sclimbic/models/sclimbic.fsm+ad.t1.nstd00-50.nstd32-50.h5

Computing etiv from scratchmri_convert --conform FOLDER/subjID.mgz /var/folders/vd/g4zth0dn6nldcx62m0l827sr0000gn/T/tmpk6kr248m/nu.mgz reading from FOLDER/subjID.mgz...error: could not allocate memory for slice 1 out of 256error: mri_convert --conform failed!