To see whether the final label is correct, load the label in freeview or
tksurfer and see if it looks right.

You can use mris_anatomical_stats to get the volumes, etc, from the
label (-l option). You may want to recombine the lobes into an
annotation with mris_label2annot

doug

On 05/05/2016 12:17 PM, Heidi Foo wrote:
> Dear FreeSurfer experts,
>
> I apologise for posting this again. I am unable to get the volumes for
> the cortical regions despite following the commands on
> https://surfer.nmr.mgh.harvard.edu/fswiki/CorticalParcellation
>
> I am using FS5.3 to do the parcellation.
>
> I created a folder called "labels" inside each of my subject folder.
> Attached the output.
>
> I tried to use mri_mergelabels -i label1 -i label2 -o outputlabel.
> Attached the command as well as the output.
> *I am not sure if the output is correct and also, how should I get the
> total volume for each lobe out? *
> Thank you so much for your help.
> Regards,
> Heidi Foo
>
>
> _______________________________________________
> Freesurfer mailing list
> Freesurfer@nmr.mgh.harvard.edu
> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer

--
Douglas N. Greve, Ph.D.
MGH-NMR Center
greve@nmr.mgh.harvard.edu
Phone Number: 617-724-2358
Fax: 617-726-7422

Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting
FileDrop: https://gate.nmr.mgh.harvard.edu/filedrop2
www.nmr.mgh.harvard.edu/facility/filedrop/index.html
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