Hi Douglas Greve,
 
        Yes, I’m getting the same result as mentioned below.
 
Regards,
Janani
 
 
 
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------
 
Did you get exactly the same error?
 
On 07/14/2017 02:05 AM, M Janani wrote:
> 
> Hi Douglas Greve 
> <https://www.mail-archive.com/search?l=freesurfer@nmr.mgh.harvard.edu&q=from:%22Douglas+Greve%22>,
> 
>               Thanks for your support.
> 
> I tried with the  --reshape-factor 6. But it didn’t work for me.
> 
>               The segmentation was created using the below mentioned data
> 
> 1.SPM standard ROI
> 
> 2..dat file generated using the T1.nii(available in SPM8 template) and 
> fsaverage.
> 
> Please help us to proceed further.
> 
> Regards,
> 
> Janani
> 
> -----------------------------------------------------------------------------------------------------------------------------------------------------------------------
> 
> How did you create the segmentation? You can change the shape of the 
> seg with mri_surf2surf --reshape 6 --s fsaverage --hemi lh --sval 
> seg.mgh --tval seg.reshape.mgh
> 
> On 7/7/17 10:15 AM, M Janani wrote:
> Hi Team,
> 
> I'm attempting to extract cortical thickness values for a 
> region-of-interest (ROI) defined in volume spacesubject for PiB MRI.
> 
> I got the below mentioned error while computing the stats value
> cwd
> 
> cmdline mri_segstats --seg 
> freesurfer/subjects/fsaverage/surf/lh.fsaverage.CBLROI.mgh --in 
> lh.thickness.fsaverage.mgh --sum segstats-CBLROI.txt
> 
> sysname  Linux
> hostname teslak80
> machine  x86_64
> user     lakshman
> UseRobust  0
> Loading /freesurfer/subjects/fsaverage/surf/lh.fsaverage.CBLROI.mgh
> Loading lh.thickness.fsaverage.mgh
> ERROR: dimension mismatch between input volume and seg
>   input 27307 1 6
>   seg   23406 1 7
> 
> I tried with the solution provided in the below mail, but it didn’t 
> work for me
> 
> https://mail.nmr.mgh.harvard.edu/pipermail//freesurfer/2013-January/027405.html
>  
> <https://mail.nmr.mgh.harvard.edu/pipermail/freesurfer/2013-January/027405.html>
>  
> <https://mail.nmr.mgh.harvard.edu/pipermail/freesurfer/2013-January/027405.html>
> 
> Any help would be really helpful.
> Regards,
> Janani
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-- 
Douglas N. Greve, Ph.D.
MGH-NMR Center
gr...@nmr.mgh.harvard.edu
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