Yes, but if there is an anat2orig2diff.bbr.lta file, use that instead

On 11/22/2021 12:48 PM, Zeng, Qi wrote:

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Sorry for the trouble, I seemed to find the registration matrix located in xfms/anatorig2diff.bbr.dat. Is that one correct?

Best, 
Jackie



On Mon, Nov 22, 2021 at 12:36 PM Zeng, Qi <qi.zeng@icahn.mssm.edu> wrote:
Hi Experts, 

My tracula completed with no error. So I was trying to view the fa.nii with the following command:
freeview -v mri/brain.mgz  mri/orig.mgz mri/wmparc.mgz:colormap=lut:opacity=0.2 dmri/dtifit_FA.nii:reg=touch/rusage.mri_ca_register.dat:colormap=heat:heatscale=.2,.2,1 -colorscale -viewport coronal. 

It returned with an error message saying: "reading registration failed". I have looked at the register.dat from the following link: RegisterDat - Free Surfer Wiki (harvard.edu). My register.dat is nothing like that (attached below). So where should the file locate?

Best, 
Jackie




--

Ph.D. candidate 
Icahn School of Medicine at Mount Sinai


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