I'd guess you can ssh into the system and run recon-all from within a virtual terminal using 'screen'.
'man screen' for details if it exists on your target system.
(note: ctrl-a-d will detach you from a screen, which will let you logout and reconnect to the window later)
Hi all,
Can I run recon-all in background? The command line looks like this:
ssh node11 "recon-all -autorecon1 -subjid XXX" &
Thanks in advance,
Xiangchuan Chen
_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer