I like to regress out the linear drift, mean, and head motion generated by the motion correction step of fsfast from the raw time course only. Is it possible using fsfast?
Xiaomin
> Date: Wed, 26 Mar 2014 11:28:57 -0400
> From: greve@nmr.mgh.harvard.edu
> To: freesurfer@nmr.mgh.harvard.edu
> Subject: Re: [Freesurfer] fsfast question
>
>
> Sorry, I don't follow what you are asking. FSFAST does not do any drift
> removal from the raw data, all of that is in the design matrix
> doug
>
> On 03/26/2014 10:45 AM, Xiaomin Yue wrote:
> > Hi,
> >
> > The analysis necessary to my study is to run some analysis on the raw
> > time course data. Before working on the raw time course data, it is
> > necessary to remove linear drifting, mean, and head motion. Can I
> > just specify those parameters without having conditions in the steps
> > of generating design matrix? If so, what command should be used?
> >
> > Thanks,
> > Xiaomin Yue
> >
> >
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> --
> Douglas N. Greve, Ph.D.
> MGH-NMR Center
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