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The command used by me is below:

find $input_dir -name "sub-CC1*.nii.gz" | parallel -j $threads recon-all -i {} -s {.} -all -qcache

发件人: Quanjiang Liu
发送时间: 2024年6月27日 2:11
收件人: freesurfer@nmr.mgh.harvard.edu <freesurfer@nmr.mgh.harvard.edu>
主题: The file absence problem of the recon-all -all output

Hi, I ran the recon-all -all command successfully. But the lh.seghead and rh.seghead didn't appear in my output folder. The attachment is the process record. Can you help to solve it?

Sorry to bother.

Best