hmmm, if it does not have tag 28 30, then something is really wrong.
This is a Siemens dicom, right? What scanner?
doug
> Also, some of the runs in the "scan.info <http://scan.info>" file say
On 05/22/2014 06:05 PM, Caroline Lewis wrote:
> Thanks Douglas. Now I am running into other errors. I ran the command:
>
> unpacksdcmdir -src 0008 -targ 0008/mri/orig -fsfast \
> ? -run 8 bold nii 001.nii
>
> ERROR: reading
> 0008/11147SACC000.MR.RESEARCH_NEURO.8.1.2014.05.13.14.42.14.530.48877356.dcm
> tag 28 30
>
> "err" where it should say "ok"
>
> Do you have any idea why I'm getting these errors?
>
> Thanks,
>
> Caroline
>
>
> On Thu, May 22, 2014 at 4:16 PM, Douglas N Greve
> <greve@nmr.mgh.harvard.edu <mailto:greve@nmr.mgh.harvard.edu>> wrote:> targetdir/scan.info <http://scan.info> <http://scan.info>
>
> Remove the \<<NIFTI>>
>
> On 05/22/2014 03:45 PM, Caroline Lewis wrote:
> > Hi,
> >
> > I am trying to unpack dicom files and convert them to nifti, but am
> > running into an error. I ran the following command with no issue:
> > unpacksdcmdir -src dicomdir -targ targetdir -scanonly
> >> <mailto:Freesurfer@nmr.mgh.harvard.edu>
> >
> > however, when I try to run the next command to actually unpack
> the data:
> >
> > unpacksdcmdir -src 0008 -targ NIFTI -fsfast \
> > ? -run 7 3danat mgz 001.mgz \<<NIFTI>>
> >
> > I get the following error message: Missing name for redirect.
> > Thanks,
> >
> > Caroline
> >
> >
> > _______________________________________________
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> > Freesurfer@nmr.mgh.harvard.edu
> > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer> greve@nmr.mgh.harvard.edu <mailto:greve@nmr.mgh.harvard.edu>
>
> --
> Douglas N. Greve, Ph.D.
> MGH-NMR Center
> Phone Number: 617-724-2358 <tel:617-724-2358>
> Fax: 617-726-7422 <tel:617-726-7422>
>
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> <http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting>
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> www.nmr.mgh.harvard.edu/facility/filedrop/index.html
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--
Douglas N. Greve, Ph.D.
MGH-NMR Center
greve@nmr.mgh.harvard.edu
Phone Number: 617-724-2358
Fax: 617-726-7422
Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting
FileDrop: https://gate.nmr.mgh.harvard.edu/filedrop2
www.nmr.mgh.harvard.edu/facility/filedrop/index.html
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