Dear All,
I designed an adaptive filter according to local gyrification index values and then want to see the lgi histogram of new smoothed brain volume. However freesurfer gave an error as:
ERROR: mritotal failed, see transforms/talairach.log
It seems that the input volume orientation has changed. But the input volume is the smoothed version of norm.mgz which is also an output of freesurfer.
Could anyone come up with a solution for this issue?