When trying to run segmentHA_T1.sh I keep getting the following error log that I am having a lot of trouble debugging. Matlab 2014b is installed. Any help or guidance would be greatly appreciated!
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USER dcallow
HOST
compute-4-9.bswift.umd.eduPROCESSID 8771
PROCESSOR x86_64
OS Linux
ITK_GLOBAL_DEFAULT_NUMBER_OF_THREADS 1
Linux
compute-4-9.bswift.umd.edu 2.6.32-754.15.3.el6.x86_64 #1 SMP Thu Jun 13 22:49:44 EDT 2019 x86_64 x86_64 x86_64 GNU/Linux
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freesurfer-darwin-OSX-ElCapitan-dev-20190326-01e71dc
setenv SUBJECTS_DIR /homes/dcallow/freesurfer_Tracy
cd /a/ha-nfs-1-ib/export/home/bswift/dcallow
/homes/dcallow/freesurfer_dev/bin/segmentHA_T1.sh HMN002
#--------------------------------------------
#@# Hippocampal Subfields processing (T1) left Sun Aug 4 15:08:35 EDT 2019
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Setting up environment variables
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DYLD_LIBRARY_PATH is .:/homes/dcallow/freesurfer_dev/MCRv84//runtime/maci64:/homes/dcallow/freesurfer_dev/MCRv84//bin/maci64:/homes/dcallow/freesurfer_dev/MCRv84//sys/os/maci64:/hom$
/homes/dcallow/freesurfer_dev/bin/run_segmentSubjectT1_autoEstimateAlveusML.sh: line 33: /homes/dcallow/freesurfer_dev/bin/segmentSubjectT1_autoEstimateAlveusML.app/Contents/MacOS/s$
@#@FSTIME 2019:08:04:15:08:35 run_segmentSubjectT1_autoEstimateAlveusML.sh N 13 e 0.07 S 0.00 U 0.00 P 15% M 1360 F 0 R 2250 W 0 c 13 w 171 I 40 O 0 L 0.12 0.68 0.88
@#@FSLOADPOST 2019:08:04:15:08:35 run_segmentSubjectT1_autoEstimateAlveusML.sh N 13 0.12 0.68 0.88
Linux
compute-4-9.bswift.umd.edu 2.6.32-754.15.3.el6.x86_64 #1 SMP Thu Jun 13 22:49:44 EDT 2019 x86_64 x86_64 x86_64 GNU/Linux
T1 hippocampal subfields exited with ERRORS at Sun Aug 4 15:08:36 EDT 2019