Hi,

I am trying to do a DTI Group Analysis study using a MNI152 standard space for registration.

1). I wonder in case I want to use MNI 152 and not CVS space using TRACULA if I have to follow all the steps

starting Setting Up a Configuration File to run Tracula and then to continue with the following three steps in the TRACULA processing stream (which is called by the command trac-all):

Pre-processing
FSL's bedpostX
Reconstructing white-matter (WM) pathways

2). Can I check the registration for individual subjects to see if it worked well or not on the MNI 152 template?

3) How can I see if there are clusters that survives to multiple comparison in group 1 (controls) versus group 2 (patients) without and covariant (not gender, not age).

Can I get a txt file as output for this clusters?

Thank you.

Antonella