Yes, this is fine.

---

From: freesurfer-bounces@nmr.mgh.harvard.edu <freesurfer-bounces@nmr.mgh.harvard.edu> on behalf of Zeng, Qi <qi.zeng@icahn.mssm.edu>
Sent: Thursday, April 30, 2020 2:22 PM
To: Freesurfer support list <freesurfer@nmr.mgh.harvard.edu>
Subject: [Freesurfer] trac-all -bedp error

 

        External Email - Use Caution        

Hi, 

I run trac-all, the log file has the following endings. 

"Queuing post processing stage"

or

"Queuing post processing stage
59 slices processed
All slices processed
/hpc/packages/minerva-common/freesurfer/6.0.0/freesurfer/bin/bedpostx_mgh: line 345: kill: (100952) - No such process". 

However, all outputs described in FSL BedpostX are generated
dmri/FA, MD, V1, V2, V3
dmri.bedpostX/merged,mean,dyads, nodif_brain_mask

Should I consider them as completed and move forward with -path?

Best, 

Qi 

--

Ph.D. candidate 

Icahn School of Medicine at Mount Sinai

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